Information for 20-CCACAGGTATCCN (Motif 38)

A T G C T G A C G T C A T A G C G C T A A C T G T A C G A G C T T G C A A G C T A T G C G T A C G T C A
Reverse Opposite:
C A G T C A T G T A C G T C G A A C G T T C G A A T G C T G A C C G A T A T C G C A G T A C T G T A C G
p-value:1e-6
log p-value:-1.559e+01
Information Content per bp:1.413
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.8 +/- 31.8bp
Average Position of motif in Background58.5 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCACAGGTATCCN
-CACAGN------
 A T G C T G A C G T C A T A G C G C T A A C T G T A C G A G C T T G C A A G C T A T G C G T A C G T C A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CCACAGGTATCCN
--VCAGGTRDRY-
 A T G C T G A C G T C A T A G C G C T A A C T G T A C G A G C T T G C A A G C T A T G C G T A C G T C A
A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGTATCCN
AAACCACAGAN-----
 A C G T A C G T A C G T A T G C T G A C G T C A T A G C G C T A A C T G T A C G A G C T T G C A A G C T A T G C G T A C G T C A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGTATCCN
AAACCACAGC------
 A C G T A C G T A C G T A T G C T G A C G T C A T A G C G C T A A C T G T A C G A G C T T G C A A G C T A T G C G T A C G T C A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCACAGGTATCCN
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A T G C T G A C G T C A T A G C G C T A A C T G T A C G A G C T T G C A A G C T A T G C G T A C G T C A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCACAGGTATCCN
-AACAGGTGT---
 A T G C T G A C G T C A T A G C G C T A A C T G T A C G A G C T T G C A A G C T A T G C G T A C G T C A
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCACAGGTATCCN
-GACAGGTGTN--
 A T G C T G A C G T C A T A G C G C T A A C T G T A C G A G C T T G C A A G C T A T G C G T A C G T C A
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCACAGGTATCCN
NAAACCACAG-------
 A C G T A C G T A C G T A C G T A T G C T G A C G T C A T A G C G C T A A C T G T A C G A G C T T G C A A G C T A T G C G T A C G T C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCACAGGTATCCN
-NNCAGGTGTN--
 A T G C T G A C G T C A T A G C G C T A A C T G T A C G A G C T T G C A A G C T A T G C G T A C G T C A
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCACAGGTATCCN
-NNCAGGTGNN--
 A T G C T G A C G T C A T A G C G C T A A C T G T A C G A G C T T G C A A G C T A T G C G T A C G T C A
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T