Information for 2-CAACRACCAAGGGCCT (Motif 3)

A T G C C G T A C G T A G T A C T C G A T C G A G T A C A T G C C T G A G T C A C T A G A C T G A T C G A G T C T A G C C G A T
Reverse Opposite:
C G T A A T C G A C T G A T G C A G T C A G T C C A G T A G C T A T C G A C T G A G C T A G C T C A T G G C A T G C A T A T C G
p-value:1e-14
log p-value:-3.325e+01
Information Content per bp:1.683
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.3 +/- 18.9bp
Average Position of motif in Background53.2 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAACRACCAAGGGCCT
--CCGCCCAAGGGCAG
 A T G C C G T A C G T A G T A C T C G A T C G A G T A C A T G C C T G A G T C A C T A G A C T G A T C G A G T C T A G C C G A T
A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAACRACCAAGGGCCT
--NTGCCCANNGGTNA
 A T G C C G T A C G T A G T A C T C G A T C G A G T A C A T G C C T G A G T C A C T A G A C T G A T C G A G T C T A G C C G A T
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.56
Offset:10
Orientation:forward strand
Alignment:CAACRACCAAGGGCCT--
----------AGGCCTAG
 A T G C C G T A C G T A G T A C T C G A T C G A G T A C A T G C C T G A G T C A C T A G A C T G A T C G A G T C T A G C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.55
Offset:10
Orientation:forward strand
Alignment:CAACRACCAAGGGCCT--
----------AGGCCTNG
 A T G C C G T A C G T A G T A C T C G A T C G A G T A C A T G C C T G A G T C A C T A G A C T G A T C G A G T C T A G C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CAACRACCAAGGGCCT-
-------CAAGGHCANV
 A T G C C G T A C G T A G T A C T C G A T C G A G T A C A T G C C T G A G T C A C T A G A C T G A T C G A G T C T A G C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CAACRACCAAGGGCCT
-----NTCAAGGTCA-
 A T G C C G T A C G T A G T A C T C G A T C G A G T A C A T G C C T G A G T C A C T A G A C T G A T C G A G T C T A G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAACRACCAAGGGCCT
---AAACCACAGC---
 A T G C C G T A C G T A G T A C T C G A T C G A G T A C A T G C C T G A G T C A C T A G A C T G A T C G A G T C T A G C C G A T
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAACRACCAAGGGCCT
---AAACCACAGAN--
 A T G C C G T A C G T A G T A C T C G A T C G A G T A C A T G C C T G A G T C A C T A G A C T G A T C G A G T C T A G C C G A T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CAACRACCAAGGGCCT
-----AACAAAGG---
 A T G C C G T A C G T A G T A C T C G A T C G A G T A C A T G C C T G A G T C A C T A G A C T G A T C G A G T C T A G C C G A T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAACRACCAAGGGCCT
---TGCCCCCGGGCA-
 A T G C C G T A C G T A G T A C T C G A T C G A G T A C A T G C C T G A G T C A C T A G A C T G A T C G A G T C T A G C C G A T
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T