Information for 18-TYTCTGATGCCGTGGG (Motif 29)

C G A T A G C T A C G T A T G C A C G T A T C G G C T A C A G T A C T G A T G C A G T C T C A G A C G T A C T G C T A G C T A G
Reverse Opposite:
A G T C A G T C G T A C G T C A A G T C C T A G A T C G A G T C G C T A C G A T A T G C C G T A A T C G T C G A T C G A C G T A
p-value:1e-7
log p-value:-1.806e+01
Information Content per bp:1.743
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.3 +/- 24.1bp
Average Position of motif in Background45.0 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1/MA0509.1/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TYTCTGATGCCGTGGG---
-----GTTGCCATGGNAAC
 C G A T A G C T A C G T A T G C A C G T A T C G G C T A C A G T A C T G A T G C A G T C T C A G A C G T A C T G C T A G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TYTCTGATGCCGTGGG
---CTGTTGCTAGGS-
 C G A T A G C T A C G T A T G C A C G T A T C G G C T A C A G T A C T G A T G C A G T C T C A G A C G T A C T G C T A G C T A G
A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TYTCTGATGCCGTGGG--
----NGTTGCCATGGCAA
 C G A T A G C T A C G T A T G C A C G T A T C G G C T A C A G T A C T G A T G C A G T C T C A G A C G T A C T G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

CREB3L1/MA0839.1/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TYTCTGATGCCGTGGG--
----TGATGACGTGGCAN
 C G A T A G C T A C G T A T G C A C G T A T C G G C T A C A G T A C T G A T G C A G T C T C A G A C G T A C T G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TYTCTGATGCCGTGGG--
----GGTTGCCATGGCAA
 C G A T A G C T A C G T A T G C A C G T A T C G G C T A C A G T A C T G A T G C A G T C T C A G A C G T A C T G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TYTCTGATGCCGTGGG---
---CGGTTGCCATGGCAAC
 C G A T A G C T A C G T A T G C A C G T A T C G G C T A C A G T A C T G A T G C A G T C T C A G A C G T A C T G C T A G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TYTCTGATGCCGTGGG
---MTGATGCAAT---
 C G A T A G C T A C G T A T G C A C G T A T C G G C T A C A G T A C T G A T G C A G T C T C A G A C G T A C T G C T A G C T A G
A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TYTCTGATGCCGTGGG
--GCTGTTACCCT---
 C G A T A G C T A C G T A T G C A C G T A T C G G C T A C A G T A C T G A T G C A G T C T C A G A C G T A C T G C T A G C T A G
A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TYTCTGATGCCGTGGG
---ATGATGCAAT---
 C G A T A G C T A C G T A T G C A C G T A T C G G C T A C A G T A C T G A T G C A G T C T C A G A C G T A C T G C T A G C T A G
A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TYTCTGATGCCGTGGG-
--NNCGTTGCTATGGNN
 C G A T A G C T A C G T A T G C A C G T A T C G G C T A C A G T A C T G A T G C A G T C T C A G A C G T A C T G C T A G C T A G A C G T
A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A