Information for 9-GCATGCATCT (Motif 27)

A C T G A G T C C G T A A G C T A C T G G T A C C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G G T C A A C G T A C T G G T A C C T G A C G A T T C A G G T A C
p-value:1e-8
log p-value:-1.888e+01
Information Content per bp:1.784
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif208.8
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets48.2 +/- 24.4bp
Average Position of motif in Background52.6 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCATGCATCT-----
---NVCAGCTGBBNN
 A C T G A G T C C G T A A G C T A C T G G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCATGCATCT------
---TGCAGCTGTCCCT
 A C T G A G T C C G T A A G C T A C T G G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCATGCATCT---
---CGCAGCTGCG
 A C T G A G T C C G T A A G C T A C T G G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCATGCATCT-
AGGAAACAGCTG
 A C G T A C T G A G T C C G T A A G C T A C T G G T A C C G T A A C G T A G T C A C G T A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCATGCATCT---
---ACCATCTGTT
 A C T G A G T C C G T A A G C T A C T G G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCATGCATCT--
--NNACAGCTGC
 A C T G A G T C C G T A A G C T A C T G G T A C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCATGCATCT---
---CGCACCTGCT
 A C T G A G T C C G T A A G C T A C T G G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCATGCATCT---
--NNGCAGCTGTT
 A C T G A G T C C G T A A G C T A C T G G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCATGCATCT---
--NNGCAGCTGTC
 A C T G A G T C C G T A A G C T A C T G G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCATGCATCT-
---ANCAGCTG
 A C T G A G T C C G T A A G C T A C T G G T A C C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G