p-value: | 1e-9 |
log p-value: | -2.232e+01 |
Information Content per bp: | 1.836 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.68% |
Number of Background Sequences with motif | 2.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.8 +/- 11.9bp |
Average Position of motif in Background | 38.9 +/- 15.1bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 1 |
Score: | 0.56 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CCGCCTSCCTWTGTCC- -------YCTTTGTTCC |
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ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 2 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCGCCTSCCTWTGTCC--- GCCTCCTCCMTCWGACTGKS |
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Sox2/MA0143.3/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CCGCCTSCCTWTGTCC -------CCTTTGTT- |
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PLAG1/MA0163.1/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCGCCTSCCTWTGTCC-- ----CCCCCTTGGGCCCC |
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Sox3/MA0514.1/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CCGCCTSCCTWTGTCC- -------CCTTTGTTTT |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CCGCCTSCCTWTGTCC ------NCCATTGTTC |
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Sox6/MA0515.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CCGCCTSCCTWTGTCC- -------CCATTGTTTT |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CCGCCTSCCTWTGTCC- -------CCWTTGTYYB |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CCGCCTSCCTWTGTCC -------CCWTTGTY- |
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SP2/MA0516.1/Jaspar
Match Rank: | 10 |
Score: | 0.49 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCGCCTSCCTWTGTCC GCCCCGCCCCCTCCC---- |
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