Information for 7-CGTSTASMMATGA (Motif 8)

G A T C C T A G A C G T A T C G C A G T T C G A A T G C G T A C G T A C C G T A C G A T A C T G C T G A
Reverse Opposite:
G A C T T G A C C G T A A C G T C A T G A C T G A T C G A C G T G T C A T A G C C G T A A G T C C T A G
p-value:1e-12
log p-value:-2.869e+01
Information Content per bp:1.673
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.6 +/- 26.2bp
Average Position of motif in Background41.2 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGTSTASMMATGA
CGTCTAGACA---
 G A T C C T A G A C G T A T C G C A G T T C G A A T G C G T A C G T A C C G T A C G A T A C T G C T G A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGTSTASMMATGA
TTATGTACTAATAA
 A C G T G A T C C T A G A C G T A T C G C A G T T C G A A T G C G T A C G T A C C G T A C G A T A C T G C T G A
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGTSTASMMATGA-
AAATGGACCAATCAG
 A C G T G A T C C T A G A C G T A T C G C A G T T C G A A T G C G T A C G T A C C G T A C G A T A C T G C T G A A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.57
Offset:8
Orientation:forward strand
Alignment:CGTSTASMMATGA-
--------CATGAC
 G A T C C T A G A C G T A T C G C A G T T C G A A T G C G T A C G T A C C G T A C G A T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGTSTASMMATGA-------
--TGGACCAATCAGCACTCT
 G A T C C T A G A C G T A T C G C A G T T C G A A T G C G T A C G T A C C G T A C G A T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGTSTASMMATGA--
-----GGCCATTAAC
 G A T C C T A G A C G T A T C G C A G T T C G A A T G C G T A C G T A C C G T A C G A T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGTSTASMMATGA
-GTTGCGCAAT--
 G A T C C T A G A C G T A T C G C A G T T C G A A T G C G T A C G T A C C G T A C G A T A C T G C T G A
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T

PH0081.1_Pdx1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGTSTASMMATGA----
-NTGNGCTAATTACCNN
 G A T C C T A G A C G T A T C G C A G T T C G A A T G C G T A C G T A C C G T A C G A T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T G T C A G A C T A T C G C G T A C T A G A T G C G A C T T G C A G C T A C A G T A C G T C T G A T A G C G A T C A C G T A C G T

LHX9/MA0701.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CGTSTASMMATGA-
------CCAATTAA
 G A T C C T A G A C G T A T C G C A G T T C G A A T G C G T A C G T A C C G T A C G A T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G T C A C G T A A C G T A C G T C T G A T C G A

EN2/MA0642.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CGTSTASMMATGA--
-----CCCAATTAGC
 G A T C C T A G A C G T A T C G C A G T T C G A A T G C G T A C G T A C C G T A C G A T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C