Information for 6-CCCTCTAKTGGCR (Motif 7)

A G T C A G T C G T A C A C G T A G T C A C G T C G T A A C T G A C G T A C T G T A C G A G T C T C G A
Reverse Opposite:
A G C T C T A G A G T C A G T C C G T A G T A C A C G T C G T A A C T G C G T A A C T G C T A G A C T G
p-value:1e-14
log p-value:-3.244e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.7 +/- 21.1bp
Average Position of motif in Background40.1 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------CCCTCTAKTGGCR-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T C G T A A C T G A C G T A C T G T A C G A G T C T C G A A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCTAKTGGCR-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T C G T A A C T G A C G T A C T G T A C G A G T C T C G A A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.73
Offset:-8
Orientation:forward strand
Alignment:--------CCCTCTAKTGGCR
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T C G T A A C T G A C G T A C T G T A C G A G T C T C G A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CCCTCTAKTGGCR
-------TTGGCA
 A G T C A G T C G T A C A C G T A G T C A C G T C G T A A C T G A C G T A C T G T A C G A G T C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCCTCTAKTGGCR--
------NTTGGCANN
 A G T C A G T C G T A C A C G T A G T C A C G T C G T A A C T G A C G T A C T G T A C G A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

SRF/MA0083.3/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCTAKTGGCR
TGNCCATATATGGTCA
 A C G T A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T C G T A A C T G A C G T A C T G T A C G A G T C T C G A
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTAKTGGCR--
NANTTTCAAGTGGTTAN
 A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T C G T A A C T G A C G T A C T G T A C G A G T C T C G A A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCCTCTAKTGGCR
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T C G T A A C T G A C G T A C T G T A C G A G T C T C G A
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCCTCTAKTGGCR
--BTBRAGTGSN-
 A G T C A G T C G T A C A C G T A G T C A C G T C G T A A C T G A C G T A C T G T A C G A G T C T C G A
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CCCTCTAKTGGCR--
-----NNTTGGCANN
 A G T C A G T C G T A C A C G T A G T C A C G T C G T A A C T G A C G T A C T G T A C G A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C