Information for 13-AGCTGGCATT (Motif 19)

C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G T C G T A C G T C A A C T G A T G C A C G T
p-value:1e-6
log p-value:-1.531e+01
Information Content per bp:1.926
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif36.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets39.8 +/- 24.7bp
Average Position of motif in Background49.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGCTGGCATT
GGTTGGCAT-
 C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGGCATT---
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGCTGGCATT
NGTGGGCAT-
 C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCATT--
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGGCATT--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCATT--
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCATT--
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCATT--
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGCTGGCATT--
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGCTGGCATT
GGTCTGGCAT-
 A C G T C G T A A T C G A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T