Information for 12-CCCCACGCCT (Motif 18)

A G T C A G T C A G T C A G T C C T G A A G T C A T C G G A T C A G T C A G C T
Reverse Opposite:
C T G A A C T G C T A G T A G C C T A G A G C T A C T G C T A G A C T G T C A G
p-value:1e-6
log p-value:-1.532e+01
Information Content per bp:1.832
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif102.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets39.9 +/- 31.1bp
Average Position of motif in Background46.1 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP3/MA0746.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCCCACGCCT--
-GCCACGCCCCC
 A G T C A G T C A G T C A G T C C T G A A G T C A T C G G A T C A G T C A G C T A C G T A C G T
A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCCCACGCCT---
NNGGCCACGCCTTTN
 A C G T A C G T A G T C A G T C A G T C A G T C C T G A A G T C A T C G G A T C A G T C A G C T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCCCACGCCT
GCCCCGCCCCC
 A C G T A G T C A G T C A G T C A G T C C T G A A G T C A T C G G A T C A G T C A G C T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCCCACGCCT
YCCGCCCACGCN-
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C C T G A A G T C A T C G G A T C A G T C A G C T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCCCACGCCT
-AGCGCGCC-
 A G T C A G T C A G T C A G T C C T G A A G T C A T C G G A T C A G T C A G C T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCCCACGCCT
GCCCCGCCCC-
 A C G T A G T C A G T C A G T C A G T C C T G A A G T C A T C G G A T C A G T C A G C T
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCCCACGCCT
CRCCCACGCA-
 A C G T A G T C A G T C A G T C A G T C C T G A A G T C A T C G G A T C A G T C A G C T
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T

EGR4/MA0733.1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCCCACGCCT--
TTACGCCCACGCATTT
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C C T G A A G T C A T C G G A T C A G T C A G C T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

SP8/MA0747.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCCCACGCCT---
-GCCACGCCCACT
 A G T C A G T C A G T C A G T C C T G A A G T C A T C G G A T C A G T C A G C T A C G T A C G T A C G T
A C G T T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCCCACGCCT
---CACGCA-
 A G T C A G T C A G T C A G T C C T G A A G T C A T C G G A T C A G T C A G C T
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T