Information for 10-GGAATTTCCC (Motif 16)

C A T G T C A G G T C A C G T A G C A T A C G T A C G T A T G C T A G C A G T C
Reverse Opposite:
T C A G A T C G T A C G G T C A C G T A C G T A C G A T A C G T A G T C G T A C
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.649
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.64%
Number of Background Sequences with motif1301.1
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets40.5 +/- 27.8bp
Average Position of motif in Background50.2 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GGAATTTCCC
GGAAATTCCC
 C A T G T C A G G T C A C G T A G C A T A C G T A C G T A T G C T A G C A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCCC
GGGAATTTCC-
 A C G T C A T G T C A G G T C A C G T A G C A T A C G T A C G T A T G C T A G C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTTCCC-
GGGAAATCCCCN
 A C G T C A T G T C A G G T C A C G T A G C A T A C G T A C G T A T G C T A G C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGAATTTCCC
GGAAANCCCC
 C A T G T C A G G T C A C G T A G C A T A C G T A C G T A T G C T A G C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGAATTTCCC
GGAAATCCCC
 C A T G T C A G G T C A C G T A G C A T A C G T A C G T A T G C T A G C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------GGAATTTCCC
TTAAGAGGAAGTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C A G G T C A C G T A G C A T A C G T A C G T A T G C T A G C A G T C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAATTTCCC
NCTGGAATGC---
 A C G T A C G T A C G T C A T G T C A G G T C A C G T A G C A T A C G T A C G T A T G C T A G C A G T C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGAATTTCCC
NACAGGAAAT----
 A C G T A C G T A C G T A C G T C A T G T C A G G T C A C G T A G C A T A C G T A C G T A T G C T A G C A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGAATTTCCC
NTGGAATGTN--
 A C G T A C G T C A T G T C A G G T C A C G T A G C A T A C G T A C G T A T G C T A G C A G T C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGAATTTCCC
AGCGGAAGTG---
 A C G T A C G T A C G T C A T G T C A G G T C A C G T A G C A T A C G T A C G T A T G C T A G C A G T C
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T