Information for 17-CTMGWCGYTW (Motif 42)

A G T C A C G T G T A C A C T G C G T A A G T C A C T G A G C T A C G T C G T A
Reverse Opposite:
C G A T C G T A C T G A G T A C A C T G C G A T A G T C A C T G C G T A A C T G
p-value:1e-5
log p-value:-1.291e+01
Information Content per bp:1.843
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 43.3bp
Average Position of motif in Background28.0 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTMGWCGYTW
TGTCTAGACG---
 A C G T A C G T A C G T A G T C A C G T G T A C A C T G C G T A A G T C A C T G A G C T A C G T C G T A
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTMGWCGYTW-----
TCCGTCGCTTAAAAG
 A G T C A C G T G T A C A C T G C G T A A G T C A C T G A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CTMGWCGYTW--
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T A C A C T G C G T A A G T C A C T G A G C T A C G T C G T A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

VENTX/MA0724.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTMGWCGYTW
CTAATCGNT-
 A G T C A C G T G T A C A C T G C G T A A G T C A C T G A G C T A C G T C G T A
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTMGWCGYTW
--TGACGT--
 A G T C A C G T G T A C A C T G C G T A A G T C A C T G A G C T A C G T C G T A
A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTMGWCGYTW
--TGACGTCA
 A G T C A C G T G T A C A C T G C G T A A G T C A C T G A G C T A C G T C G T A
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTMGWCGYTW
CCAGACAG--
 A G T C A C G T G T A C A C T G C G T A A G T C A C T G A G C T A C G T C G T A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CTMGWCGYTW-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A G T C A C G T G T A C A C T G C G T A A G T C A C T G A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CTMGWCGYTW---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A G T C A C G T G T A C A C T G C G T A A G T C A C T G A G C T A C G T C G T A A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CTMGWCGYTW-
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T A C A C T G C G T A A G T C A C T G A G C T A C G T C G T A A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G