Information for 23-CTCAGGYCTGSAGGAG (Motif 41)

A G T C A G C T A G T C C G T A A C T G T A C G A G T C A G T C G A C T A T C G A T C G C G T A A C T G A C T G C T G A C T A G
Reverse Opposite:
A G T C A G C T T A G C A G T C C G A T A T G C A T G C C G T A T A C G T C A G A G T C A G T C A C G T A C T G C T G A A C T G
p-value:1e-6
log p-value:-1.442e+01
Information Content per bp:1.720
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.7 +/- 6.1bp
Average Position of motif in Background49.3 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCAGGYCTGSAGGAG
CACAGN----------
 A G T C A G C T A G T C C G T A A C T G T A C G A G T C A G T C G A C T A T C G A T C G C G T A A C T G A C T G C T G A C T A G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTCAGGYCTGSAGGAG
--CAGGTGAGG-----
 A G T C A G C T A G T C C G T A A C T G T A C G A G T C A G T C G A C T A T C G A T C G C G T A A C T G A C T G C T G A C T A G
A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGGYCTGSAGGAG
GCCTCAGGGCAT------
 A C G T A C G T A G T C A G C T A G T C C G T A A C T G T A C G A G T C A G T C G A C T A T C G A T C G C G T A A C T G A C T G C T G A C T A G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGGYCTGSAGGAG
TGCCCAGNHW--------
 A C G T A C G T A G T C A G C T A G T C C G T A A C T G T A C G A G T C A G T C G A C T A T C G A T C G C G T A A C T G A C T G C T G A C T A G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTCAGGYCTGSAGGAG
SCCTSAGGSCAW------
 A C G T A C G T A G T C A G C T A G T C C G T A A C T G T A C G A G T C A G T C G A C T A T C G A T C G C G T A A C T G A C T G C T G A C T A G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTCAGGYCTGSAGGAG
AGCCTCAGGCA--------
 A C G T A C G T A C G T A G T C A G C T A G T C C G T A A C T G T A C G A G T C A G T C G A C T A T C G A T C G C G T A A C T G A C T G C T G A C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTCAGGYCTGSAGGAG
---AGGCCTNG-----
 A G T C A G C T A G T C C G T A A C T G T A C G A G T C A G T C G A C T A T C G A T C G C G T A A C T G A C T G C T G A C T A G
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CTCAGGYCTGSAGGAG
CGCCTCAGGCA--------
 A C G T A C G T A C G T A G T C A G C T A G T C C G T A A C T G T A C G A G T C A G T C G A C T A T C G A T C G C G T A A C T G A C T G C T G A C T A G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CTCAGGYCTGSAGGAG
-TCAGTCTT-------
 A G T C A G C T A G T C C G T A A C T G T A C G A G T C A G T C G A C T A T C G A T C G C G T A A C T G A C T G C T G A C T A G
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CTCAGGYCTGSAGGAG
AGCCACTCAAG----------
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A G T C C G T A A C T G T A C G A G T C A G T C G A C T A T C G A T C G C G T A A C T G A C T G C T G A C T A G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T