Information for 22-NNDVTACTAMRAADHN (Motif 40)

C A T G G T A C C A T G T C A G G C A T C T G A G T A C G C A T C G T A G T A C T C A G G T C A C G T A C T A G G T A C G A T C
Reverse Opposite:
C T A G C A T G G A T C G C A T C A G T A G T C C A T G G C A T C G T A C A T G G A C T C G T A A G T C G T A C C A T G G T A C
p-value:1e-6
log p-value:-1.442e+01
Information Content per bp:1.332
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 19.7bp
Average Position of motif in Background29.1 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----NNDVTACTAMRAADHN
ACTCCAAGTACTTGGAA---
 A C G T A C G T A C G T A C G T C A T G G T A C C A T G T C A G G C A T C T G A G T A C G C A T C G T A G T A C T C A G G T C A C G T A C T A G G T A C G A T C
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:NNDVTACTAMRAADHN
-CCGTATTATAAACAA
 C A T G G T A C C A T G T C A G G C A T C T G A G T A C G C A T C G T A G T A C T C A G G T C A C G T A C T A G G T A C G A T C
A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:NNDVTACTAMRAADHN-
-ATTTACGACAAATAGC
 C A T G G T A C C A T G T C A G G C A T C T G A G T A C G C A T C G T A G T A C T C A G G T C A C G T A C T A G G T A C G A T C A C G T
A C G T C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PB0106.1_Arid5a_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:NNDVTACTAMRAADHN-
CATACAATACGAAATAA
 C A T G G T A C C A T G T C A G G C A T C T G A G T A C G C A T C G T A G T A C T C A G G T C A C G T A C T A G G T A C G A T C A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:NNDVTACTAMRAADHN
--NTTTCTNAGAAA--
 C A T G G T A C C A T G T C A G G C A T C T G A G T A C G C A T C G T A G T A C T C A G G T C A C G T A C T A G G T A C G A T C
A C G T A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---NNDVTACTAMRAADHN
TACTAAGTACTTAAATG--
 A C G T A C G T A C G T C A T G G T A C C A T G T C A G G C A T C T G A G T A C G C A T C G T A G T A C T C A G G T C A C G T A C T A G G T A C G A T C
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:NNDVTACTAMRAADHN
----TTCTTGGAAAN-
 C A T G G T A C C A T G T C A G G C A T C T G A G T A C G C A T C G T A G T A C T C A G G T C A C G T A C T A G G T A C G A T C
A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-NNDVTACTAMRAADHN
TTATGTACTAATAA---
 A C G T C A T G G T A C C A T G T C A G G C A T C T G A G T A C G C A T C G T A G T A C T C A G G T C A C G T A C T A G G T A C G A T C
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:NNDVTACTAMRAADHN
--AATATTAATAAAGA
 C A T G G T A C C A T G T C A G G C A T C T G A G T A C G C A T C G T A G T A C T C A G G T C A C G T A C T A G G T A C G A T C
A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PB0181.1_Spdef_2/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:NNDVTACTAMRAADHN---
---CTACTAGGATGTNNTN
 C A T G G T A C C A T G T C A G G C A T C T G A G T A C G C A T C G T A G T A C T C A G G T C A C G T A C T A G G T A C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C