Information for 4-TRCCHTATCAGCC (Motif 4)

C A G T C T G A A G T C A G T C G A C T A G C T G T C A A G C T A G T C C G T A A C T G A G T C A G T C
Reverse Opposite:
C T A G C T A G A G T C C G A T A C T G C T G A A C G T C T G A C T G A C T A G A C T G G A C T G T C A
p-value:1e-15
log p-value:-3.561e+01
Information Content per bp:1.744
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif63.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets40.3 +/- 29.9bp
Average Position of motif in Background48.2 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.63
Offset:8
Orientation:forward strand
Alignment:TRCCHTATCAGCC
--------CAGCC
 C A G T C T G A A G T C A G T C G A C T A G C T G T C A A G C T A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TRCCHTATCAGCC--
NTNTTCTTATCAGTNTN
 A C G T A C G T C A G T C T G A A G T C A G T C G A C T A G C T G T C A A G C T A G T C C G T A A C T G A G T C A G T C A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:TRCCHTATCAGCC----
------GTCAGCANNTN
 C A G T C T G A A G T C A G T C G A C T A G C T G T C A A G C T A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.61
Offset:7
Orientation:forward strand
Alignment:TRCCHTATCAGCC--
-------TCAGTCTT
 C A G T C T G A A G T C A G T C G A C T A G C T G T C A A G C T A G T C C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TRCCHTATCAGCC----
--CTGAGTCAGCAATTT
 C A G T C T G A A G T C A G T C G A C T A G C T G T C A A G C T A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TRCCHTATCAGCC--
-------BCAGACWA
 C A G T C T G A A G T C A G T C G A C T A G C T G T C A A G C T A G T C C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TRCCHTATCAGCC------
-GCTGAGTCAGCAATTTTT
 C A G T C T G A A G T C A G T C G A C T A G C T G T C A A G C T A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TRCCHTATCAGCC
--YCTTATCWVN-
 C A G T C T G A A G T C A G T C G A C T A G C T G T C A A G C T A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TRCCHTATCAGCC
TGCTGASTCAGC-
 C A G T C T G A A G T C A G T C G A C T A G C T G T C A A G C T A G T C C G T A A C T G A G T C A G T C
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TRCCHTATCAGCC----
-----NGTCAGCANTTT
 C A G T C T G A A G T C A G T C G A C T A G C T G T C A A G C T A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T