Information for 23-CCTGCTTGAGCTA (Motif 39)

A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A T G C A C G T C G T A
Reverse Opposite:
A C G T G T C A A T C G A G T C A C G T A G T C C G T A C G T A A C T G A G T C C G T A A C T G A C T G
p-value:1e-6
log p-value:-1.442e+01
Information Content per bp:1.945
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 28.7bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTGCTTGAGCTA
GRTGMTRGAGCC-
 A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A T G C A C G T C G T A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTGCTTGAGCTA
TGACCTTGACCT-
 A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A T G C A C G T C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCTGCTTGAGCTA------
-----TTGACCTANTTATN
 A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A T G C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCTTGAGCTA-
NNANTGATTGATNNNN
 A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A T G C A C G T C G T A A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

DUX4/MA0468.1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCTGCTTGAGCTA
--TGATTAAATTA
 A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A T G C A C G T C G T A
A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCTGCTTGAGCTA---
NAAACCGGTTNNAACCGGTT
 A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A T G C A C G T C G T A A C G T A C G T A C G T
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCTTGAGCTA-
NNANTGATTGATNTTN
 A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A T G C A C G T C G T A A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCTGCTTGAGCTA
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A T G C A C G T C G T A
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CCTGCTTGAGCTA
--TGCGTG-----
 A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A T G C A C G T C G T A
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CCTGCTTGAGCTA
-TTGATTGN----
 A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C T G C G T A A C T G A T G C A C G T C G T A
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T