Information for 20-ATGGGTTATTTTTATT (Motif 33)

C G T A C A G T C T A G A C T G A C T G A C G T A G C T C T G A A C G T A C G T C G A T A C G T A G C T G T C A G A C T A C G T
Reverse Opposite:
T G C A C T G A A C G T C T G A G T C A C G T A T C G A C G T A G A C T C T G A T G C A T A G C G T A C G A T C G T C A A C G T
p-value:1e-8
log p-value:-1.939e+01
Information Content per bp:1.649
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif135.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets39.6 +/- 24.1bp
Average Position of motif in Background51.0 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:ATGGGTTATTTTTATT
----KCTATTTTTRGH
 C G T A C A G T C T A G A C T G A C T G A C G T A G C T C T G A A C G T A C G T C G A T A C G T A G C T G T C A G A C T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:ATGGGTTATTTTTATT--
---TTCTATTTTTAGNNN
 C G T A C A G T C T A G A C T G A C T G A C G T A G C T C T G A A C G T A C G T C G A T A C G T A G C T G T C A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:ATGGGTTATTTTTATT
----GCTATTTTTAGC
 C G T A C A G T C T A G A C T G A C T G A C G T A G C T C T G A A C G T A C G T C G A T A C G T A G C T G T C A G A C T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGGGTTATTTTTATT-
-NNTTTTGTTTTGATNT
 C G T A C A G T C T A G A C T G A C T G A C G T A G C T C T G A A C G T A C G T C G A T A C G T A G C T G T C A G A C T A C G T A C G T
A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

HOXA13/MA0650.1/Jaspar

Match Rank:5
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:ATGGGTTATTTTTATT--
--------TTTTTATTGG
 C G T A C A G T C T A G A C T G A C T G A C G T A G C T C T G A A C G T A C G T C G A T A C G T A G C T G T C A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:ATGGGTTATTTTTATT--
--------NTTTTATTGG
 C G T A C A G T C T A G A C T G A C T G A C G T A G C T C T G A A C G T A C G T C G A T A C G T A G C T G T C A G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ATGGGTTATTTTTATT-----
-----NNANTTTTATTGGNNN
 C G T A C A G T C T A G A C T G A C T G A C G T A G C T C T G A A C G T A C G T C G A T A C G T A G C T G T C A G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATGGGTTATTTTTATT-----
----NTNAATTTTATTGNATT
 C G T A C A G T C T A G A C T G A C T G A C G T A G C T C T G A A C G T A C G T C G A T A C G T A G C T G T C A G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGGGTTATTTTTATT-
NNNNTTTTTTTTTNAAC
 C G T A C A G T C T A G A C T G A C T G A C G T A G C T C T G A A C G T A C G T C G A T A C G T A G C T G T C A G A C T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ATGGGTTATTTTTATT-----
-----NNAATTTTATTGGNTN
 C G T A C A G T C T A G A C T G A C T G A C G T A G C T C T G A A C G T A C G T C G A T A C G T A G C T G T C A G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T