Information for 18-AMWYTYTAAATAGWMW (Motif 27)

C G T A G T A C C G A T A G T C A C G T G A C T C G A T C G T A T C G A C T G A A C G T C G T A C T A G C G T A G T C A C G A T
Reverse Opposite:
C G T A C A G T C G A T A G T C A C G T C G T A A G C T A G C T A C G T C G T A C T G A C G T A C T A G C G T A A C T G A C G T
p-value:1e-8
log p-value:-2.037e+01
Information Content per bp:1.809
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.4 +/- 13.9bp
Average Position of motif in Background38.0 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2D/MA0773.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AMWYTYTAAATAGWMW
--ACTATAAATAGA--
 C G T A G T A C C G A T A G T C A C G T G A C T C G A T C G T A T C G A C T G A A C G T C G T A C T A G C G T A G T C A C G A T
A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AMWYTYTAAATAGWMW
--TCTAAAAATAGA--
 C G T A G T A C C G A T A G T C A C G T G A C T C G A T C G T A T C G A C T G A A C G T C G T A C T A G C G T A G T C A C G A T
A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AMWYTYTAAATAGWMW
---CCAAAAATAG---
 C G T A G T A C C G A T A G T C A C G T G A C T C G A T C G T A T C G A C T G A A C G T C G T A C T A G C G T A G T C A C G A T
A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AMWYTYTAAATAGWMW
--GCTATAAATAGC--
 C G T A G T A C C G A T A G T C A C G T G A C T C G A T C G T A T C G A C T G A A C G T C G T A C T A G C G T A G T C A C G A T
A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AMWYTYTAAATAGWMW
--DCYAAAAATAGM--
 C G T A G T A C C G A T A G T C A C G T G A C T C G A T C G T A T C G A C T G A A C G T C G T A C T A G C G T A G T C A C G A T
A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AMWYTYTAAATAGWMW
--KCCAAAAATAGC--
 C G T A G T A C C G A T A G T C A C G T G A C T C G A T C G T A T C G A C T G A A C G T C G T A C T A G C G T A G T C A C G A T
A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AMWYTYTAAATAGWMW
ATGCTAAAAATAGAA-
 C G T A G T A C C G A T A G T C A C G T G A C T C G A T C G T A T C G A C T G A A C G T C G T A C T A G C G T A G T C A C G A T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AMWYTYTAAATAGWMW
--GCTAAAAATAGC--
 C G T A G T A C C G A T A G T C A C G T G A C T C G A T C G T A T C G A C T G A A C G T C G T A C T A G C G T A G T C A C G A T
A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AMWYTYTAAATAGWMW
-----TTAATTAG---
 C G T A G T A C C G A T A G T C A C G T G A C T C G A T C G T A T C G A C T G A A C G T C G T A C T A G C G T A G T C A C G A T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AMWYTYTAAATAGWMW
---ATTTGAATT----
 C G T A G T A C C G A T A G T C A C G T G A C T C G A T C G T A T C G A C T G A A C G T C G T A C T A G C G T A G T C A C G A T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T