Information for 14-GGTTGACCTACTT (Motif 25)

C T A G A C T G A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
Reverse Opposite:
G T C A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A G T C C G T A G T C A G T A C A G T C
p-value:1e-9
log p-value:-2.238e+01
Information Content per bp:1.892
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.4 +/- 26.1bp
Average Position of motif in Background45.8 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:GGTTGACCTACTT---
--TTGACCTANTTATN
 C T A G A C T G A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.83
Offset:3
Orientation:reverse strand
Alignment:GGTTGACCTACTT
---TGACCTARTT
 C T A G A C T G A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GGTTGACCTACTT
---TGACCTTGAT
 C T A G A C T G A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGTTGACCTACTT
---TGACCT----
 C T A G A C T G A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGTTGACCTACTT
--GTGACCTT---
 C T A G A C T G A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGTTGACCTACTT
---TGACCTYA--
 C T A G A C T G A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GGTTGACCTACTT
---TGACCYCT--
 C T A G A C T G A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGTTGACCTACTT
--ATGACCTTGA-
 C T A G A C T G A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGACCTACTT
CNNTTGACCTTTG-
 A C G T C T A G A C T G A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T

ESR2/MA0258.2/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGTTGACCTACTT
AGGNCANNGTGACCT----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T A C G T A C G T