Information for 12-TGGTGAATGTGAG (Motif 23)

C G A T A C T G A C T G A C G T A C T G C G T A T C G A A C G T A C T G A C G T T A C G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C G T C A G T A C C G T A A G C T G A C T A G T C G T C A A G T C G T A C C G T A
p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.782
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif33.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets54.8 +/- 30.5bp
Average Position of motif in Background43.8 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGTGAATGTGAG-
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T C G A T A C T G A C T G A C G T A C T G C G T A T C G A A C G T A C T G A C G T T A C G C G T A C T A G A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGGTGAATGTGAG-
--NTGATTGACAGN
 C G A T A C T G A C T G A C G T A C T G C G T A T C G A A C G T A C T G A C G T T A C G C G T A C T A G A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGGTGAATGTGAG-
--BTGABTGACAGS
 C G A T A C T G A C T G A C G T A C T G C G T A T C G A A C G T A C T G A C G T T A C G C G T A C T A G A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGGTGAATGTGAG--
---TGAGTGACAGSC
 C G A T A C T G A C T G A C G T A C T G C G T A T C G A A C G T A C T G A C G T T A C G C G T A C T A G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGGTGAATGTGAG
NNTNTCATGAATGT---
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C G T A C T G C G T A T C G A A C G T A C T G A C G T T A C G C G T A C T A G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGTGAATGTGAG
-NTGGAATGTG--
 C G A T A C T G A C T G A C G T A C T G C G T A T C G A A C G T A C T G A C G T T A C G C G T A C T A G
A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGTGAATGTGAG
-NTGGAATGTN--
 C G A T A C T G A C T G A C G T A C T G C G T A T C G A A C G T A C T G A C G T T A C G C G T A C T A G
A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGGTGAATGTGAG
AGAAAGTGAAAGTGA-
 A C G T A C G T A C G T C G A T A C T G A C T G A C G T A C T G C G T A T C G A A C G T A C T G A C G T T A C G C G T A C T A G
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGGTGAATGTGAG
CAGGTAAGTAT---
 A C G T C G A T A C T G A C T G A C G T A C T G C G T A T C G A A C G T A C T G A C G T T A C G C G T A C T A G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TGGTGAATGTGAG----
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T C G A T A C T G A C T G A C G T A C T G C G T A T C G A A C G T A C T G A C G T T A C G C G T A C T A G A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T