Information for 15-AATTAAGCTGCCCTVC (Motif 21)

C G T A C G T A C G A T C A G T C G T A C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T T C G A A G T C
Reverse Opposite:
A C T G A C G T T G C A C T A G T C A G A C T G A G T C C G T A C T A G A T G C A C G T A C G T G T C A C G T A A C G T G C A T
p-value:1e-10
log p-value:-2.356e+01
Information Content per bp:1.770
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.3 +/- 18.6bp
Average Position of motif in Background47.6 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LMX1B/MA0703.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AATTAAGCTGCCCTVC
TTAATTAA----------
 A C G T A C G T C G T A C G T A C G A T C A G T C G T A C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T T C G A A G T C
A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AATTAAGCTGCCCTVC
NTAATTAATAT-------
 A C G T A C G T C G T A C G T A C G A T C A G T C G T A C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T T C G A A G T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0069.1_Hoxc4/Jaspar

Match Rank:3
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------AATTAAGCTGCCCTVC
NNTNNTTAATTAATNCG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C A G T C G T A C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T T C G A A G T C
C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AATTAAGCTGCCCTVC
CTAATTAA----------
 A C G T A C G T C G T A C G T A C G A T C A G T C G T A C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T T C G A A G T C
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0071.1_Hoxc6/Jaspar

Match Rank:5
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------AATTAAGCTGCCCTVC
NNTNATTAATTAATTTG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C A G T C G T A C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T T C G A A G T C
G C A T A C G T A G C T G C A T T G C A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A G C T C G A T G A C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0059.1_Hoxb4/Jaspar

Match Rank:6
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------AATTAAGCTGCCCTVC
GNTNATTAATTAACNNG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C A G T C G T A C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T T C G A A G T C
C T A G C A T G A C G T C G T A T C G A G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G T C C A T G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

LMX1A/MA0702.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AATTAAGCTGCCCTVC
TTAATTAA----------
 A C G T A C G T C G T A C G T A C G A T C A G T C G T A C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T T C G A A G T C
A G C T G A C T C T G A G C T A G C A T C G A T C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AATTAAGCTGCCCTVC
GTAATTAA----------
 A C G T A C G T C G T A C G T A C G A T C A G T C G T A C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T T C G A A G T C
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------AATTAAGCTGCCCTVC
GATTATTAATTAACTTG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C A G T C G T A C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T T C G A A G T C
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AATTAAGCTGCCCTVC
CTAATTAA----------
 A C G T A C G T C G T A C G T A C G A T C A G T C G T A C G T A A T C G A G T C A C G T A C T G G T A C A G T C A G T C A C G T T C G A A G T C
A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T