Information for 1-AGMMGKTGATTTK (Motif 2)

C T G A A C T G T G A C G T C A A C T G A C T G A C G T T A C G T G C A A C G T A C G T A C G T A C G T
Reverse Opposite:
T G C A C G T A G T C A T G C A A C G T A T G C G T C A G T A C T G A C C A G T A C T G A G T C G A C T
p-value:1e-13
log p-value:-3.216e+01
Information Content per bp:1.659
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.10%
Number of Background Sequences with motif367.1
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets43.7 +/- 20.4bp
Average Position of motif in Background50.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGMMGKTGATTTK
---CNGTGATTTN
 C T G A A C T G T G A C G T C A A C T G A C T G A C G T T A C G T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGMMGKTGATTTK
-NNTGTGGATTSS
 C T G A A C T G T G A C G T C A A C T G A C T G A C G T T A C G T G C A A C G T A C G T A C G T A C G T
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGMMGKTGATTTK-
-----TTGACTTTT
 C T G A A C T G T G A C G T C A A C T G A C T G A C G T T A C G T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGMMGKTGATTTK
SDGCAGGTGCNS--
 A C G T C T G A A C T G T G A C G T C A A C T G A C T G A C G T T A C G T G C A A C G T A C G T A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGMMGKTGATTTK-
---TGTGGATTNNN
 C T G A A C T G T G A C G T C A A C T G A C T G A C G T T A C G T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGMMGKTGATTTK-----
-TNNNATGATTTCNNCNN
 C T G A A C T G T G A C G T C A A C T G A C T G A C G T T A C G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

RREB1/MA0073.1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AGMMGKTGATTTK---
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T C T G A A C T G T G A C G T C A A C T G A C T G A C G T T A C G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGMMGKTGATTTK-
----GGGAATTTCC
 C T G A A C T G T G A C G T C A A C T G A C T G A C G T T A C G T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGMMGKTGATTTK--
---NGGGGATTTCCC
 C T G A A C T G T G A C G T C A A C T G A C T G A C G T T A C G T G C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGMMGKTGATTTK-
----GGGGATTTCC
 C T G A A C T G T G A C G T C A A C T G A C T G A C G T T A C G T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C