Information for 7-TGACAAAGTT (Motif 17)

A C G T A T C G T C G A G A T C C G T A T C G A C G T A A C T G A C G T C G A T
Reverse Opposite:
C G T A G T C A G T A C A C G T A G C T A C G T C T A G A G C T A T G C G T C A
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.833
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif103.3
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets56.1 +/- 26.1bp
Average Position of motif in Background45.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGACAAAGTT
--ACAAAG--
 A C G T A T C G T C G A G A T C C G T A T C G A C G T A A C T G A C G T C G A T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGACAAAGTT
TTGACAG----
 A C G T A C G T A T C G T C G A G A T C C G T A T C G A C G T A A C T G A C G T C G A T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGACAAAGTT
RHTGWCAR----
 A C G T A C G T A C G T A T C G T C G A G A T C C G T A T C G A C G T A A C T G A C G T C G A T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGACAAAGTT
TGACCTARTT
 A C G T A T C G T C G A G A T C C G T A T C G A C G T A A C T G A C G T C G A T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGACAAAGTT
ARNTGACA-----
 A C G T A C G T A C G T A C G T A T C G T C G A G A T C C G T A T C G A C G T A A C T G A C G T C G A T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGACAAAGTT---
TTGACCTANTTATN
 A C G T A C G T A T C G T C G A G A T C C G T A T C G A C G T A A C T G A C G T C G A T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGACAAAGTT
VRRACAAWGG-
 A C G T A C G T A T C G T C G A G A T C C G T A T C G A C G T A A C T G A C G T C G A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGACAAAGTT
TTGACAGG---
 A C G T A C G T A T C G T C G A G A T C C G T A T C G A C G T A A C T G A C G T C G A T
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGACAAAGTT
-RACAAWGG-
 A C G T A T C G T C G A G A T C C G T A T C G A C G T A A C T G A C G T C G A T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGACAAAGTT--
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A T C G T C G A G A T C C G T A T C G A C G T A A C T G A C G T C G A T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T