Information for 6-CTCAACGAAG (Motif 16)

A G T C C A G T G T A C C G T A C T G A A G T C C T A G T G C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C A C T G A G C T A C G T A C T G G C T A A C T G
p-value:1e-9
log p-value:-2.107e+01
Information Content per bp:1.864
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif24.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.0 +/- 25.1bp
Average Position of motif in Background54.5 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CTCAACGAAG-
-----NGAAGC
 A G T C C A G T G T A C C G T A C T G A A G T C C T A G T G C A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCAACGAAG-
-GGAACAAAGR
 A G T C C A G T G T A C C G T A C T G A A G T C C T A G T G C A C G T A A C T G A C G T
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTCAACGAAG-----
AGAAGAACAAAGGACTA
 A C G T A C G T A G T C C A G T G T A C C G T A C T G A A G T C C T A G T G C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCAACGAAG-----
ATAAGAACAAAGGACTA
 A C G T A C G T A G T C C A G T G T A C C G T A C T G A A G T C C T A G T G C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

GLIS3/MA0737.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTCAACGAAG
GACCCCCCACGAAG
 A C G T A C G T A C G T A C G T A G T C C A G T G T A C C G T A C T G A A G T C C T A G T G C A C G T A A C T G
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTCAACGAAG--
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A G T C C A G T G T A C C G T A C T G A A G T C C T A G T G C A C G T A A C T G A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTCAACGAAG-
---AACAAAGG
 A G T C C A G T G T A C C G T A C T G A A G T C C T A G T G C A C G T A A C T G A C G T
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CTCAACGAAG-
AGACCCCCCACGAAGC
 A C G T A C G T A C G T A C G T A C G T A G T C C A G T G T A C C G T A C T G A A G T C C T A G T G C A C G T A A C T G A C G T
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

BARHL2/MA0635.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTCAACGAAG
GCTAAACGGT-
 A C G T A G T C C A G T G T A C C G T A C T G A A G T C C T A G T G C A C G T A A C T G
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCAACGAAG-
-VRRACAAWGG
 A G T C C A G T G T A C C G T A C T G A A G T C C T A G T G C A C G T A A C T G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G