Information for 3-AAGCCCCAAA (Motif 13)

C G T A C G T A A C T G A G T C A G T C A T G C A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A T C G A C T G A C T G G T A C A C G T A C G T
p-value:1e-10
log p-value:-2.406e+01
Information Content per bp:1.936
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.9 +/- 26.1bp
Average Position of motif in Background45.7 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAGCCCCAAA
AAACCGCAAA
 C G T A C G T A A C T G A G T C A G T C A T G C A G T C C G T A C G T A C G T A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----AAGCCCCAAA-
AGGCTAATCCCCAANG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A T G C A G T C C G T A C G T A C G T A A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGCCCCAAA
AAACCGCAA-
 C G T A C G T A A C T G A G T C A G T C A T G C A G T C C G T A C G T A C G T A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAGCCCCAAA-
AAACCACAGAN
 C G T A C G T A A C T G A G T C A G T C A T G C A G T C C G T A C G T A C G T A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGCCCCAAA
AAACCACANN
 C G T A C G T A A C T G A G T C A G T C A T G C A G T C C G T A C G T A C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAGCCCCAAA
SSAATCCACANN
 A C G T A C G T C G T A C G T A A C T G A G T C A G T C A T G C A G T C C G T A C G T A C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAGCCCCAAA
TCCAATCCACA--
 A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A T G C A G T C C G T A C G T A C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAGCCCCAAA---
AGGAGACCCCCAATTTG
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A T G C A G T C C G T A C G T A C G T A A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGCCCCAAA
TAATCCCN---
 A C G T C G T A C G T A A C T G A G T C A G T C A T G C A G T C C G T A C G T A C G T A
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAGCCCCAAA
--TCCCCA--
 C G T A C G T A A C T G A G T C A G T C A T G C A G T C C G T A C G T A C G T A
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T