Information for 16-CAGTCACAAAGCG (Motif 25)

A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C T G
p-value:1e-6
log p-value:-1.486e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.3 +/- 9.0bp
Average Position of motif in Background60.5 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CAGTCACAAAGCG
-----ACAAAG--
 A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAGTCACAAAGCG
--VRRACAAWGG-
 A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CAGTCACAAAGCG----
-----ACAAAGGNBCCT
 A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGTCACAAAGCG
--GGAACAAAGR-
 A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAGTCACAAAGCG
----RACAAWGG-
 A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGTCACAAAGCG-
TAAAGTCGTAAAACGT
 A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTCACAAAGCG-----
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGTCACAAAGCG
--RNAACAATGG-
 A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGTCACAAAGCG
--AAAACAAAGG-
 A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CAGTCACAAAGCG
----AACAAAGG-
 A G T C C G T A A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T