Information for 5-RATGGCAGTGAGG (Motif 10)

C T A G C G T A C A G T A C T G A C T G A G T C G C T A C T A G A C G T T C A G C T G A C A T G C T A G
Reverse Opposite:
G A T C G T A C A G C T A G T C G T C A G A T C C A G T A C T G A G T C A G T C G T C A G A C T G A T C
p-value:1e-9
log p-value:-2.251e+01
Information Content per bp:1.747
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif39.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.3 +/- 26.8bp
Average Position of motif in Background49.5 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-RATGGCAGTGAGG--
NNNTGGCAGTTGGTNN
 A C G T C T A G C G T A C A G T A C T G A C T G A G T C G C T A C T A G A C G T T C A G C T G A C A T G C T A G A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:RATGGCAGTGAGG
--TGGCAGTTGG-
 C T A G C G T A C A G T A C T G A C T G A G T C G C T A C T A G A C G T T C A G C T G A C A T G C T A G
A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:RATGGCAGTGAGG
--TGGCAGTTGN-
 C T A G C G T A C A G T A C T G A C T G A G T C G C T A C T A G A C G T T C A G C T G A C A T G C T A G
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-RATGGCAGTGAGG
TAATGGCGGNC---
 A C G T C T A G C G T A C A G T A C T G A C T G A G T C G C T A C T A G A C G T T C A G C T G A C A T G C T A G
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RATGGCAGTGAGG
TNNGGGCAG-----
 A C G T C T A G C G T A C A G T A C T G A C T G A G T C G C T A C T A G A C G T T C A G C T G A C A T G C T A G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RATGGCAGTGAGG
-TTGGCA------
 C T A G C G T A C A G T A C T G A C T G A G T C G C T A C T A G A C G T T C A G C T G A C A T G C T A G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--RATGGCAGTGAGG-
NNNNTGCCAGTGATTG
 A C G T A C G T C T A G C G T A C A G T A C T G A C T G A G T C G C T A C T A G A C G T T C A G C T G A C A T G C T A G A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:RATGGCAGTGAGG
NTTGGCANN----
 C T A G C G T A C A G T A C T G A C T G A G T C G C T A C T A G A C G T T C A G C T G A C A T G C T A G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:RATGGCAGTGAGG
---GGCVGTTR--
 C T A G C G T A C A G T A C T G A C T G A G T C G C T A C T A G A C G T T C A G C T G A C A T G C T A G
A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RATGGCAGTGAGG--
CACGGCAGTTGGTNN
 C T A G C G T A C A G T A C T G A C T G A G T C G C T A C T A G A C G T T C A G C T G A C A T G C T A G A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G