Information for 22-SCTGCTGTTCCCC (Motif 34)

A T G C T A G C C G A T A T C G G T A C G C A T T A C G A G C T C A G T A G T C G A T C G A T C G A T C
Reverse Opposite:
C T A G C T A G C T A G T C A G G T C A T C G A A T G C C G T A C A T G T A G C G C T A A T C G T A C G
p-value:1e-12
log p-value:-2.891e+01
Information Content per bp:1.606
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets38.5 +/- 26.3bp
Average Position of motif in Background47.2 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-SCTGCTGTTCCCC
TGCAGCTGTCCCT-
 A C G T A T G C T A G C C G A T A T C G G T A C G C A T T A C G A G C T C A G T A G T C G A T C G A T C G A T C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:SCTGCTGTTCCCC
--TKCTGTTCCA-
 A T G C T A G C C G A T A T C G G T A C G C A T T A C G A G C T C A G T A G T C G A T C G A T C G A T C
A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:SCTGCTGTTCCCC
CCAGCTGTTN---
 A T G C T A G C C G A T A T C G G T A C G C A T T A C G A G C T C A G T A G T C G A T C G A T C G A T C
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:SCTGCTGTTCCCC
-CAGCTGTT----
 A T G C T A G C C G A T A T C G G T A C G C A T T A C G A G C T C A G T A G T C G A T C G A T C G A T C
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:SCTGCTGTTCCCC
-CAGCTGTTTCCT
 A T G C T A G C C G A T A T C G G T A C G C A T T A C G A G C T C A G T A G T C G A T C G A T C G A T C
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--SCTGCTGTTCCCC
NNGCAGCTGTT----
 A C G T A C G T A T G C T A G C C G A T A T C G G T A C G C A T T A C G A G C T C A G T A G T C G A T C G A T C G A T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---SCTGCTGTTCCCC
CCCCCTGCTGTG----
 A C G T A C G T A C G T A T G C T A G C C G A T A T C G G T A C G C A T T A C G A G C T C A G T A G T C G A T C G A T C G A T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--SCTGCTGTTCCCC
NNGCAGCTGTC----
 A C G T A C G T A T G C T A G C C G A T A T C G G T A C G C A T T A C G A G C T C A G T A G T C G A T C G A T C G A T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-SCTGCTGTTCCCC
AGCAGCTGCTNN--
 A C G T A T G C T A G C C G A T A T C G G T A C G C A T T A C G A G C T C A G T A G T C G A T C G A T C G A T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:SCTGCTGTTCCCC
-CAGCTGNT----
 A T G C T A G C C G A T A T C G G T A C G C A T T A C G A G C T C A G T A G T C G A T C G A T C G A T C
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T