p-value: | 1e-16 |
log p-value: | -3.883e+01 |
Information Content per bp: | 1.406 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 3.14% |
Number of Background Sequences with motif | 1.4 |
Percentage of Background Sequences with motif | 0.26% |
Average Position of motif in Targets | 55.1 +/- 27.9bp |
Average Position of motif in Background | 67.5 +/- 5.2bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 1 |
Score: | 0.72 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTGTCCTCTGCC--- --TGACCTTTGCCCTA |
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Pparg::Rxra/MA0065.2/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTGTCCTCTGCC---- --TGACCTTTGCCCTAN |
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PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer
Match Rank: | 3 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGTGTCCTCTGCC--- --TGACCTTTGCCCCA |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGTGTCCTCTGCC -CTGACCTTTG-- |
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Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer
Match Rank: | 5 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGTGTCCTCTGCC-- NSTGTTTRCWCAGBNNN |
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NR2C2/MA0504.1/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTGTCCTCTGCC---- --TGACCTCTGACCCCN |
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TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer
Match Rank: | 7 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTGTCCTCTGCC--- --TGACCTTTGACCTC |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTGTCCTCTGCC --TGACCTYA--- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGTGTCCTCTGCC -GTGACCTT---- |
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PB0118.1_Esrra_2/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGTGTCCTCTGCC- NNNNTTGACCCCTNNNN |
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