Information for 21-AATTGCTCGA (Motif 21)

G T C A T C G A A G C T A C G T C T A G A G T C C G A T A T G C A T C G G C T A
Reverse Opposite:
C A G T A T G C A T C G C G T A T A C G A G T C G T C A T C G A A G C T A C G T
p-value:1e-19
log p-value:-4.474e+01
Information Content per bp:1.711
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.47%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets47.5 +/- 28.6bp
Average Position of motif in Background53.2 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCTCGA
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G C T A C G T C T A G A G T C C G A T A T G C A T C G G C T A
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.71
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCTCGA
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G C T A C G T C T A G A G T C C G A T A T G C A T C G G C T A
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0007.1_Barx1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AATTGCTCGA-
AAAGTAATTAGTGAAT
 A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G C T A C G T C T A G A G T C C G A T A T G C A T C G G C T A A C G T
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

PH0024.1_Dlx5/Jaspar

Match Rank:4
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCTCGA
NANNGNTAATTACCNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G C T A C G T C T A G A G T C C G A T A T G C A T C G G C T A
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:5
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCTCGA
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G C T A C G T C T A G A G T C C G A T A T G C A T C G G C T A
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:6
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------AATTGCTCGA
ATTNNTTAATTGCTTGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G C T A C G T C T A G A G T C C G A T A T G C A T C G G C T A
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0009.1_Bsx/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AATTGCTCGA-
CAGGTAATTACCTCAG
 A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G C T A C G T C T A G A G T C C G A T A T G C A T C G G C T A A C G T
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AATTGCTCGA---
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T G T C A T C G A A G C T A C G T C T A G A G T C C G A T A T G C A T C G G C T A A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Nobox/MA0125.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AATTGCTCGA
TAATTGGT---
 A C G T G T C A T C G A A G C T A C G T C T A G A G T C C G A T A T G C A T C G G C T A
A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T A C G T A C G T A C G T

GBX2/MA0890.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AATTGCTCGA
NNTAATTGNN---
 A C G T A C G T A C G T G T C A T C G A A G C T A C G T C T A G A G T C C G A T A T G C A T C G G C T A
T A C G A G T C C G A T T G C A T G C A A C G T A G C T C T A G T A C G A G C T A C G T A C G T A C G T