Information for 1-TCTAAAKGMA (Motif 1)

A G C T G T A C G C A T T G C A C T G A C T G A C A G T C T A G T G A C G C T A
Reverse Opposite:
C G A T A C T G G A T C G T C A G A C T G A C T A C G T C G T A C A T G T C G A
p-value:1e-49
log p-value:-1.141e+02
Information Content per bp:1.486
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif16.20%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif2.42%
Average Position of motif in Targets53.2 +/- 29.4bp
Average Position of motif in Background39.9 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TCTAAAKGMA
-CTAATKGV-
 A G C T G T A C G C A T T G C A C T G A C T G A C A G T C T A G T G A C G C T A
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCTAAAKGMA
GCTAATTGCT
 A G C T G T A C G C A T T G C A C T G A C T G A C A G T C T A G T G A C G C T A
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCTAAAKGMA
-TTAAGTGC-
 A G C T G T A C G C A T T G C A C T G A C T G A C A G T C T A G T G A C G C T A
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCTAAAKGMA----
ACTATGAATGAATGAT
 A C G T A C G T A G C T G T A C G C A T T G C A C T G A C T G A C A G T C T A G T G A C G C T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTAAAKGMA
GCTAAACGGT
 A G C T G T A C G C A T T G C A C T G A C T G A C A G T C T A G T G A C G C T A
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCTAAAKGMA----
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A G C T G T A C G C A T T G C A C T G A C T G A C A G T C T A G T G A C G C T A A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCTAAAKGMA--
BAGTCATANTGAAAG
 A C G T A C G T A C G T A G C T G T A C G C A T T G C A C T G A C T G A C A G T C T A G T G A C G C T A A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTAAAKGMA
-NTAATTGN-
 A G C T G T A C G C A T T G C A C T G A C T G A C A G T C T A G T G A C G C T A
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTAAAKGMA
-TTAAGTGGN
 A G C T G T A C G C A T T G C A C T G A C T G A C A G T C T A G T G A C G C T A
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTAAAKGMA-
-NTAATKGTTT
 A G C T G T A C G C A T T G C A C T G A C T G A C A G T C T A G T G A C G C T A A C G T
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T