Information for 2-TACCAGTGGCACA (Motif 6)

A G C T G T C A T A G C G T A C G T C A T A C G A C G T A C T G A C T G A G T C C G T A A G T C C T G A
Reverse Opposite:
A G C T A C T G A C G T A C T G A G T C A G T C G T C A A T G C A C G T A C T G A C T G C A G T C T G A
p-value:1e-12
log p-value:-2.785e+01
Information Content per bp:1.809
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.4 +/- 19.4bp
Average Position of motif in Background74.3 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TACCAGTGGCACA-------
----CGAAGCACACAAAATA
 A G C T G T C A T A G C G T A C G T C A T A C G A C G T A C T G A C T G A G T C C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TACCAGTGGCACA
----NTTGGCANN
 A G C T G T C A T A G C G T A C G T C A T A C G A C G T A C T G A C T G A G T C C G T A A G T C C T G A
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TACCAGTGGCACA--
CAATCACTGGCAGAAT
 A C G T A G C T G T C A T A G C G T A C G T C A T A C G A C G T A C T G A C T G A G T C C G T A A G T C C T G A A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TACCAGTGGCACA
---NNTTGGCANN
 A G C T G T C A T A G C G T A C G T C A T A C G A C G T A C T G A C T G A G T C C G T A A G T C C T G A
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TACCAGTGGCACA
---GGTTGGCAT-
 A G C T G T C A T A G C G T A C G T C A T A C G A C G T A C T G A C T G A G T C C G T A A G T C C T G A
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TACCAGTGGCACA
-----TTGGCA--
 A G C T G T C A T A G C G T A C G T C A T A C G A C G T A C T G A C T G A G T C C G T A A G T C C T G A
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TACCAGTGGCACA-
----CCAGGAACAG
 A G C T G T C A T A G C G T A C G T C A T A C G A C G T A C T G A C T G A G T C C G T A A G T C C T G A A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TACCAGTGGCACA-------
----AGCGGCACACACGCAA
 A G C T G T C A T A G C G T A C G T C A T A C G A C G T A C T G A C T G A G T C C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TACCAGTGGCACA
----CTTGGCAA-
 A G C T G T C A T A G C G T A C G T C A T A C G A C G T A C T G A C T G A G T C C G T A A G T C C T G A
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TACCAGTGGCACA
---NGTGGGCAT-
 A G C T G T C A T A G C G T A C G T C A T A C G A C G T A C T G A C T G A G T C C G T A A G T C C T G A
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T