Information for 15-CGTGATCACG (Motif 44)

A G T C A C T G A C G T A C T G C T G A A C G T A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G C G T A A G C T A G T C C G T A A G T C A C T G
p-value:1e-2
log p-value:-6.231e+00
Information Content per bp:1.957
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 25.7bp
Average Position of motif in Background25.6 +/- 10.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CGTGATCACG---
---GGTCACGTGG
 A G T C A C T G A C G T A C T G C T G A A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CGTGATCACG-
---AGTCACGC
 A G T C A C T G A C G T A C T G C T G A A C G T A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CGTGATCACG---
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G C T G A A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CGTGATCACG---
---GGTCACGTGC
 A G T C A C T G A C G T A C T G C T G A A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGTGATCACG-
---GATGACGT
 A G T C A C T G A C G T A C T G C T G A A C G T A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CGTGATCACG----
---GGTCACGTGGC
 A G T C A C T G A C G T A C T G C T G A A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

MLX/MA0663.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CGTGATCACG----
----ATCACGTGAT
 A G T C A C T G A C G T A C T G C T G A A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T G T A C C G T A G A T C A C T G A G C T C T A G T G C A G A C T

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGTGATCACG
CAGTGTGGTCGC-
 A C G T A C G T A C G T A G T C A C T G A C G T A C T G C T G A A C G T A G T C C G T A A G T C A C T G
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGTGATCACG---
-CCGGTCACGTGA
 A G T C A C T G A C G T A C T G C T G A A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGTGATCACG----
----ATCACGTGAC
 A G T C A C T G A C G T A C T G C T G A A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C