p-value: | 1e-5 |
log p-value: | -1.208e+01 |
Information Content per bp: | 1.357 |
Number of Target Sequences with motif | 57.0 |
Percentage of Target Sequences with motif | 11.03% |
Number of Background Sequences with motif | 2378.8 |
Percentage of Background Sequences with motif | 5.90% |
Average Position of motif in Targets | 50.3 +/- 23.6bp |
Average Position of motif in Background | 50.8 +/- 46.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.28 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0170.1_Sox17_2/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --NNVATGTATGNNN-- NTTNTATGAATGTGNNC |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---NNVATGTATGNNN NNTNTCATGAATGT-- |
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SRF/MA0083.3/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --NNVATGTATGNNN- TGNCCATATATGGTCA |
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DMRT3/MA0610.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | NNVATGTATGNNN --AATGTATCAAT |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | NNVATGTATGNNN ---ATGMATATDC |
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PH0082.1_Irx2/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----NNVATGTATGNNN ANTNTTACATGTATNTA- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -NNVATGTATGNNN--- NNTNNTGTCTGGNNTNG |
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PH0083.1_Irx3_1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----NNVATGTATGNNN ANTATTACATGTANNNN- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | NNVATGTATGNNN -VBSYGTCTGG-- |
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PH0084.1_Irx3_2/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----NNVATGTATGNNN NNTATTACATGTANNNT- |
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