Information for 20-GGGCGGTGTCCGC (Motif 38)

A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C T G C G T A A G T C C G T A A G T C A G T C A C T G A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.280e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.3 +/- 26.4bp
Average Position of motif in Background42.7 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGTGTCCGC
NNAGGGGCGGGGTNNA-
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGGCGGTGTCCGC--
---CAACGTCCGCGG
 A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGCGGTGTCCGC--
GGGCGATGACCAYTC
 A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGTGTCCGC
GGGGGTGTGTCC--
 A C G T A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGTGTCCGC
NNVDGGGYGGGGCYN--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGTGTCCGC
GGGGGCGGGGCC---
 A C G T A C G T A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGTGTCCGC
RGKGGGCGGAGC----
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGTGTCCGC
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGTGTCCGC--
GCGGAGGTGTCGCCTC
 A C G T A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGGTGTCCGC
NANAAGGGCGTGGTC---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C T G A G T C
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T A C G T