Information for 17-CTGTCACAKGCATCAC (Motif 35)

A T G C A C G T A C T G A C G T A G T C G T C A A G T C C G T A A C G T A T C G A T G C C G T A A C G T A G T C G C T A T A G C
Reverse Opposite:
A C T G C A G T C T A G G T C A A C G T T A C G A T G C G T C A A C G T A C T G A C G T A C T G C G T A A G T C C G T A T A C G
p-value:1e-7
log p-value:-1.693e+01
Information Content per bp:1.781
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets35.4 +/- 18.4bp
Average Position of motif in Background73.5 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTGTCACAKGCATCAC
--GTCACATGAY----
 A T G C A C G T A C T G A C G T A G T C G T C A A G T C C G T A A C G T A T C G A T G C C G T A A C G T A G T C G C T A T A G C
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCACAKGCATCAC
CCTGTCAA---------
 A C G T A T G C A C G T A C T G A C G T A G T C G T C A A G T C C G T A A C G T A T C G A T G C C G T A A C G T A G T C G C T A T A G C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGTCACAKGCATCAC
NTGTCAN---------
 A T G C A C G T A C T G A C G T A G T C G T C A A G T C C G T A A C G T A T C G A T G C C G T A A C G T A G T C G C T A T A G C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCACAKGCATCAC
GCTGTCAA---------
 A C G T A T G C A C G T A C T G A C G T A G T C G T C A A G T C C G T A A C G T A T C G A T G C C G T A A C G T A G T C G C T A T A G C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGTCACAKGCATCAC
-TGTCANYT-------
 A T G C A C G T A C T G A C G T A G T C G T C A A G T C C G T A A C G T A T C G A T G C C G T A A C G T A G T C G C T A T A G C
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGTCACAKGCATCAC
-GGTCACATGAC----
 A T G C A C G T A C T G A C G T A G T C G T C A A G T C C G T A A C G T A T C G A T G C C G T A A C G T A G T C G C T A T A G C
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTGTCACAKGCATCAC
--GTCACGTGGM----
 A T G C A C G T A C T G A C G T A G T C G T C A A G T C C G T A A C G T A T C G A T G C C G T A A C G T A G T C G C T A T A G C
A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTCACAKGCATCAC
-GGTCACGTGGC----
 A T G C A C G T A C T G A C G T A G T C G T C A A G T C C G T A A C G T A T C G A T G C C G T A A C G T A G T C G C T A T A G C
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGTCACAKGCATCAC
YTGWCADY--------
 A T G C A C G T A C T G A C G T A G T C G T C A A G T C C G T A A C G T A T C G A T G C C G T A A C G T A G T C G C T A T A G C
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGTCACAKGCATCAC
--GTCACGTGGT----
 A T G C A C G T A C T G A C G T A G T C G T C A A G T C C G T A A C G T A T C G A T G C C G T A A C G T A G T C G C T A T A G C
A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T A C G T A C G T A C G T