Information for 14-CCATGCACAGAGC (Motif 28)

T A G C T A G C C G T A A C G T A C T G A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A G T C C G T A A C G T A T C G A T C G
p-value:1e-7
log p-value:-1.786e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 31.8bp
Average Position of motif in Background53.1 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCATGCACAGAGC
CCAGGAACAG---
 T A G C T A G C C G T A A C G T A C T G A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCATGCACAGAGC
GCGCATGCGCAG---
 A C G T A C G T T A G C T A G C C G T A A C G T A C T G A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCATGCACAGAGC---
CGAAGCACACAAAATA
 T A G C T A G C C G T A A C G T A C T G A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

REST/MA0138.2/Jaspar

Match Rank:4
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------CCATGCACAGAGC-
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A G C C G T A A C G T A C T G A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCATGCACAGAGC
GCGCATGCGCAC---
 A C G T A C G T T A G C T A G C C G T A A C G T A C T G A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------CCATGCACAGAGC-
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A G C C G T A A C G T A C T G A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCATGCACAGAGC
---TGCCCAGNHW
 T A G C T A G C C G T A A C G T A C T G A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCATGCACAGAGC
-----CACAGN--
 T A G C T A G C C G T A A C G T A C T G A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCATGCACAGAGC
TCCAATCCACA----
 A C G T A C G T T A G C T A G C C G T A A C G T A C T G A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCATGCACAGAGC
-------CGGAGC
 T A G C T A G C C G T A A C G T A C T G A G T C C T G A A G T C C G T A A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C