Information for 6-TGCACACGTG (Motif 27)

A G C T T C A G G T A C T C G A A G T C T G C A A T G C T A C G A G C T A T C G
Reverse Opposite:
T A G C T C G A A T G C T A C G A C G T T C A G A G C T C A T G A G T C T C G A
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.655
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif13.73%
Number of Background Sequences with motif2602.1
Percentage of Background Sequences with motif6.46%
Average Position of motif in Targets51.1 +/- 24.9bp
Average Position of motif in Background50.5 +/- 49.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mlxip/MA0622.1/Jaspar

Match Rank:1
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:TGCACACGTG-
---ACACGTGC
 A G C T T C A G G T A C T C G A A G T C T G C A A T G C T A C G A G C T A T C G A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

Npas2/MA0626.1/Jaspar

Match Rank:2
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:TGCACACGTG--
--NACACGTGCN
 A G C T T C A G G T A C T C G A A G T C T G C A A T G C T A C G A G C T A T C G A C G T A C G T
A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TGCACACGTG--
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C G T A G C T T C A G G T A C T C G A A G T C T G C A A T G C T A C G A G C T A T C G A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

CLOCK/MA0819.1/Jaspar

Match Rank:4
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TGCACACGTG--
--AACACGTGTT
 A G C T T C A G G T A C T C G A A G T C T G C A A T G C T A C G A G C T A T C G A C G T A C G T
A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:TGCACACGTG--
----CACGTGNC
 A G C T T C A G G T A C T C G A A G T C T G C A A T G C T A C G A G C T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TGCACACGTG
--NVCACGTG
 A G C T T C A G G T A C T C G A A G T C T G C A A T G C T A C G A G C T A T C G
A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:TGCACACGTG--
----CACGTGDC
 A G C T T C A G G T A C T C G A A G T C T G C A A T G C T A C G A G C T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGCACACGTG--
NNACCACGTGGT
 A G C T T C A G G T A C T C G A A G T C T G C A A T G C T A C G A G C T A T C G A C G T A C G T
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:TGCACACGTG
----CACGTG
 A G C T T C A G G T A C T C G A A G T C T G C A A T G C T A C G A G C T A T C G
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

MAX/MA0058.3/Jaspar

Match Rank:10
Score:0.76
Offset:2
Orientation:forward strand
Alignment:TGCACACGTG--
--ACCACGTGCT
 A G C T T C A G G T A C T C G A A G T C T G C A A T G C T A C G A G C T A T C G A C G T A C G T
A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T