Information for 10-TGGAACTGCTGGCCTV (Motif 24)

A C G T C T A G A C T G G C T A T G C A A G T C C G A T A C T G A G T C A C G T T A C G A C T G A G T C A T G C C G A T T A C G
Reverse Opposite:
A G T C C G T A A T C G A C T G G T A C A T G C C G T A A C T G G T A C C G T A A C T G A C G T C A G T A G T C A G T C C G T A
p-value:1e-8
log p-value:-2.062e+01
Information Content per bp:1.800
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 22.0bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARA/MA0729.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGAACTGCTGGCCTV
CATTGACCTTTTGACCTC
 A C G T A C G T A C G T C T A G A C T G G C T A T G C A A G T C C G A T A C T G A G T C A C G T T A C G A C T G A G T C A T G C C G A T T A C G
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGGAACTGCTGGCCTV
--NAACAGCTGG----
 A C G T C T A G A C T G G C T A T G C A A G T C C G A T A C T G A G T C A C G T T A C G A C T G A G T C A T G C C G A T T A C G
A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGAACTGCTGGCCTV
TTGACCTTTTGACCTT
 A C G T C T A G A C T G G C T A T G C A A G T C C G A T A C T G A G T C A C G T T A C G A C T G A G T C A T G C C G A T T A C G
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGGAACTGCTGGCCTV
---ANCAGCTG-----
 A C G T C T A G A C T G G C T A T G C A A G T C C G A T A C T G A G T C A C G T T A C G A C T G A G T C A T G C C G A T T A C G
A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGAACTGCTGGCCTV
-TGACCTTTTGACCTC
 A C G T C T A G A C T G G C T A T G C A A G T C C G A T A C T G A G T C A C G T T A C G A C T G A G T C A T G C C G A T T A C G
A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGGAACTGCTGGCCTV
---AACATCTGGA---
 A C G T C T A G A C T G G C T A T G C A A G T C C G A T A C T G A G T C A C G T T A C G A C T G A G T C A T G C C G A T T A C G
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGGAACTGCTGGCCTV
---AACAGCTG-----
 A C G T C T A G A C T G G C T A T G C A A G T C C G A T A C T G A G T C A C G T T A C G A C T G A G T C A T G C C G A T T A C G
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGAACTGCTGGCCTV
-VNAVCAGCTGGC---
 A C G T C T A G A C T G G C T A T G C A A G T C C G A T A C T G A G T C A C G T T A C G A C T G A G T C A T G C C G A T T A C G
A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGGAACTGCTGGCCTV
TGGAACAGMA------
 A C G T C T A G A C T G G C T A T G C A A G T C C G A T A C T G A G T C A C G T T A C G A C T G A G T C A T G C C G A T T A C G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGGAACTGCTGGCCTV
--CAGCAGCTGN----
 A C G T C T A G A C T G G C T A T G C A A G T C C G A T A C T G A G T C A C G T T A C G A C T G A G T C A T G C C G A T T A C G
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T