Information for 9-GAGGAGGCGCTGAGCA (Motif 23)

A C T G C T G A A C T G C T A G C T G A A C T G A C T G A G T C C T A G A G T C C G A T A C T G C T G A A C T G A G T C C G T A
Reverse Opposite:
C G A T C T A G A G T C A G C T A G T C C G T A A C T G A G T C C T A G A G T C G T A C A G C T A G T C A G T C G A C T A G T C
p-value:1e-8
log p-value:-2.062e+01
Information Content per bp:1.824
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.6 +/- 27.1bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGGAGGCGCTGAGCA
AAGGKGRCGCAGGCA-
 A C T G C T G A A C T G C T A G C T G A A C T G A C T G A G T C C T A G A G T C C G A T A C T G C T G A A C T G A G T C C G T A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGGAGGCGCTGAGCA
GCGCATGCGCAG----
 A C T G C T G A A C T G C T A G C T G A A C T G A C T G A G T C C T A G A G T C C G A T A C T G C T G A A C T G A G T C C G T A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGGCGCTGAGCA
AGAGGAAGTG-------
 A C G T A C T G C T G A A C T G C T A G C T G A A C T G A C T G A G T C C T A G A G T C C G A T A C T G C T G A A C T G A G T C C G T A
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGGCGCTGAGCA
TGGGGAAGGGCM-----
 A C G T A C T G C T G A A C T G C T A G C T G A A C T G A C T G A G T C C T A G A G T C C G A T A C T G C T G A A C T G A G T C C G T A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGGCGCTGAGCA
GGCGGGGGCGGGGG---
 A C G T A C T G C T G A A C T G C T A G C T G A A C T G A C T G A G T C C T A G A G T C C G A T A C T G C T G A A C T G A G T C C G T A
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGGCGCTGAGCA
GGGGGCGGGGC------
 A C G T A C T G C T G A A C T G C T A G C T G A A C T G A C T G A G T C C T A G A G T C C G A T A C T G C T G A A C T G A G T C C G T A
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAGGAGGCGCTGAGCA
AGGGGGCGGGGCTG----
 A C G T A C G T A C T G C T G A A C T G C T A G C T G A A C T G A C T G A G T C C T A G A G T C C G A T A C T G C T G A A C T G A G T C C G T A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGGCGCTGAGCA
TGACANARRCCAGRC--
 A C G T A C T G C T G A A C T G C T A G C T G A A C T G A C T G A G T C C T A G A G T C C G A T A C T G C T G A A C T G A G T C C G T A
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAGGAGGCGCTGAGCA-
---GCCGCGCAGTGCGT
 A C T G C T G A A C T G C T A G C T G A A C T G A C T G A G T C C T A G A G T C C G A T A C T G C T G A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GAGGAGGCGCTGAGCA
ANTGCGGGGGCGGN-----
 A C G T A C G T A C G T A C T G C T G A A C T G C T A G C T G A A C T G A C T G A G T C C T A G A G T C C G A T A C T G C T G A A C T G A G T C C G T A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T A C G T