Information for 4-CATAATGCAT (Motif 15)

G A T C G C T A A C G T G T C A C T G A C G A T C T A G A G T C G C T A A C G T
Reverse Opposite:
T G C A C G A T T C A G G A T C G C T A G A C T C A G T T G C A C G A T C T A G
p-value:1e-9
log p-value:-2.119e+01
Information Content per bp:1.672
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif6.96%
Number of Background Sequences with motif840.9
Percentage of Background Sequences with motif2.09%
Average Position of motif in Targets47.2 +/- 24.3bp
Average Position of motif in Background51.0 +/- 42.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CATAATGCAT--
ATGCATWATGCATRW
 A C G T A C G T A C G T G A T C G C T A A C G T G T C A C T G A C G A T C T A G A G T C G C T A A C G T A C G T A C G T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CATAATGCAT--
TACCCACAATGCATTG
 A C G T A C G T A C G T A C G T G A T C G C T A A C G T G T C A C T G A C G A T C T A G A G T C G C T A A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

PH0148.1_Pou3f3/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CATAATGCAT-----
TNNATTATGCATANNTT
 A C G T A C G T G A T C G C T A A C G T G T C A C T G A C G A T C T A G A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CATAATGCAT
TGAATTATGCAT
 A C G T A C G T G A T C G C T A A C G T G T C A C T G A C G A T C T A G A G T C G C T A A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CATAATGCAT--
ATGAATWATTCATGA
 A C G T A C G T A C G T G A T C G C T A A C G T G T C A C T G A C G A T C T A G A G T C G C T A A C G T A C G T A C G T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CATAATGCAT
GAATATTCAT
 G A T C G C T A A C G T G T C A C T G A C G A T C T A G A G T C G C T A A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

POU4F1/MA0790.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CATAATGCAT-
ATGAATAATTAATG
 A C G T A C G T A C G T G A T C G C T A A C G T G T C A C T G A C G A T C T A G A G T C G C T A A C G T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

POU4F3/MA0791.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CATAATGCAT---
ATGCATAATTAATGAG
 A C G T A C G T A C G T G A T C G C T A A C G T G T C A C T G A C G A T C T A G A G T C G C T A A C G T A C G T A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CATAATGCAT----
----ATGMATATDC
 G A T C G C T A A C G T G T C A C T G A C G A T C T A G A G T C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATAATGCAT-
-MTGATGCAAT
 G A T C G C T A A C G T G T C A C T G A C G A T C T A G A G T C G C T A A C G T A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T