Information for 5-TGCCYCTGTSTMC (Motif 10)

A C G T A T C G G A T C G T A C G A C T A T G C G C A T T A C G G A C T T A C G A G C T G T C A G A T C
Reverse Opposite:
C T A G C A G T T C G A A T G C C T G A A T G C C G T A A T C G C T G A C A T G C T A G T A G C C G T A
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.597
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif16.63%
Number of Background Sequences with motif3133.5
Percentage of Background Sequences with motif7.78%
Average Position of motif in Targets53.6 +/- 23.9bp
Average Position of motif in Background49.1 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCCYCTGTSTMC
BNTGDCCTTG-----
 A C G T A C G T A C G T A T C G G A T C G T A C G A C T A T G C G C A T T A C G G A C T T A C G A G C T G T C A G A T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCCYCTGTSTMC---
TGACCCAGTGACCTAC
 A C G T A T C G G A T C G T A C G A C T A T G C G C A T T A C G G A C T T A C G A G C T G T C A G A T C A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCCYCTGTSTMC
TTCCTCT------
 A C G T A T C G G A T C G T A C G A C T A T G C G C A T T A C G G A C T T A C G A G C T G T C A G A T C
C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGCCYCTGTSTMC
-----CTGTTTAC
 A C G T A T C G G A T C G T A C G A C T A T G C G C A T T A C G G A C T T A C G A G C T G T C A G A T C
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCCYCTGTSTMC
TGACCTTGAV---
 A C G T A T C G G A T C G T A C G A C T A T G C G C A T T A C G G A C T T A C G A G C T G T C A G A T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCYCTGTSTMC
NNNNATGACCTTGANTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A T C G T A C G A C T A T G C G C A T T A C G G A C T T A C G A G C T G T C A G A T C
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TGCCYCTGTSTMC
----GCTGTG---
 A C G T A T C G G A T C G T A C G A C T A T G C G C A T T A C G G A C T T A C G A G C T G T C A G A T C
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCCYCTGTSTMC
NTGACCTTGA----
 A C G T A C G T A T C G G A T C G T A C G A C T A T G C G C A T T A C G G A C T T A C G A G C T G T C A G A T C
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGCCYCTGTSTMC
ATGACCTTGA----
 A C G T A C G T A T C G G A T C G T A C G A C T A T G C G C A T T A C G G A C T T A C G A G C T G T C A G A T C
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCCYCTGTSTMC
TGACCTTGACCT-
 A C G T A T C G G A T C G T A C G A C T A T G C G C A T T A C G G A C T T A C G A G C T G T C A G A T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T