Information for 1-AGTTCACATGGCAGAG (Motif 1)

C T G A C T A G C G A T A G C T G T A C G T C A A T G C T C G A A C G T A T C G T A C G A G T C C G T A T C A G C G T A T A C G
Reverse Opposite:
A G T C C G A T A G T C A C G T T A C G A T G C A T G C G T C A A G C T A T C G A C G T A C T G T C G A G C T A G A T C G A C T
p-value:1e-14
log p-value:-3.282e+01
Information Content per bp:1.684
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif37.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets47.0 +/- 21.0bp
Average Position of motif in Background49.8 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGTTCACATGGCAGAG
-GGTCACATGAC----
 C T G A C T A G C G A T A G C T G T A C G T C A A T G C T C G A A C G T A T C G T A C G A G T C C G T A T C A G C G T A T A C G
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTTCACATGGCAGAG
-GGTCACGTGGC----
 C T G A C T A G C G A T A G C T G T A C G T C A A T G C T C G A A C G T A T C G T A C G A G T C C G T A T C A G C G T A T A C G
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGTTCACATGGCAGAG
--GTCACGTGGM----
 C T G A C T A G C G A T A G C T G T A C G T C A A T G C T C G A A C G T A T C G T A C G A G T C C G T A T C A G C G T A T A C G
A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGTTCACATGGCAGAG
-AAGCACATGG-----
 C T G A C T A G C G A T A G C T G T A C G T C A A T G C T C G A A C G T A T C G T A C G A G T C C G T A T C A G C G T A T A C G
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGTTCACATGGCAGAG
GAGGTCAAAGGTCA---
 A C G T C T G A C T A G C G A T A G C T G T A C G T C A A T G C T C G A A C G T A T C G T A C G A G T C C G T A T C A G C G T A T A C G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTTCACATGGCAGAG
GGTTGCCATGGCAA--
 C T G A C T A G C G A T A G C T G T A C G T C A A T G C T C G A A C G T A T C G T A C G A G T C C G T A T C A G C G T A T A C G
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTTCACATGGCAGAG
AAGGCCAGATGGTCCGG
 A C G T C T G A C T A G C G A T A G C T G T A C G T C A A T G C T C G A A C G T A T C G T A C G A G T C C G T A T C A G C G T A T A C G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Mycn/MA0104.3/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGTTCACATGGCAGAG
----CACGTGGC----
 C T G A C T A G C G A T A G C T G T A C G T C A A T G C T C G A A C G T A T C G T A C G A G T C C G T A T C A G C G T A T A C G
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGTTCACATGGCAGAG
AGGGGTCAGAGGTCA---
 A C G T A C G T C T G A C T A G C G A T A G C T G T A C G T C A A T G C T C G A A C G T A T C G T A C G A G T C C G T A T C A G C G T A T A C G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTTCACATGGCAGAG
TGATGACGTGGCAN--
 C T G A C T A G C G A T A G C T G T A C G T C A A T G C T C G A A C G T A T C G T A C G A G T C C G T A T C A G C G T A T A C G
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T A C G T A C G T