Information for 9-GTSMCWGTTKKWCMTT (Motif 15)

A C T G A C G T T A G C G T C A A T G C C G A T A T C G A G C T A C G T A C G T A C G T C G A T A G T C G T C A A G C T A G C T
Reverse Opposite:
C T G A C T G A C A G T A C T G G C A T G T C A T G C A C G T A C T G A A T G C C G T A A T C G A C G T A T C G C G T A A G T C
p-value:1e-11
log p-value:-2.624e+01
Information Content per bp:1.779
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 30.2bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTSMCWGTTKKWCMTT
-TGGCAGTTGN-----
 A C T G A C G T T A G C G T C A A T G C C G A T A T C G A G C T A C G T A C G T A C G T C G A T A G T C G T C A A G C T A G C T
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTSMCWGTTKKWCMTT-
-TGACCTTTTGACCTTT
 A C T G A C G T T A G C G T C A A T G C C G A T A T C G A G C T A C G T A C G T A C G T C G A T A G T C G T C A A G C T A G C T A C G T
A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTSMCWGTTKKWCMTT
NNNTGGCAGTTGGTNN--
 A C G T A C G T A C T G A C G T T A G C G T C A A T G C C G A T A T C G A G C T A C G T A C G T A C G T C G A T A G T C G T C A A G C T A G C T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTSMCWGTTKKWCMTT
-TGGCAGTTGG-----
 A C T G A C G T T A G C G T C A A T G C C G A T A T C G A G C T A C G T A C G T A C G T C G A T A G T C G T C A A G C T A G C T
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTSMCWGTTKKWCMTT
-TGTCGGTT-------
 A C T G A C G T T A G C G T C A A T G C C G A T A T C G A G C T A C G T A C G T A C G T C G A T A G T C G T C A A G C T A G C T
A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTSMCWGTTKKWCMTT
-BRRCVGTTDN-----
 A C T G A C G T T A G C G T C A A T G C C G A T A T C G A G C T A C G T A C G T A C G T C G A T A G T C G T C A A G C T A G C T
A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTSMCWGTTKKWCMTT
TTGACCTTTTGACCTT
 A C T G A C G T T A G C G T C A A T G C C G A T A T C G A G C T A C G T A C G T A C G T C G A T A G T C G T C A A G C T A G C T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTSMCWGTTKKWCMTT
-TGACCTTTTGACCTC
 A C T G A C G T T A G C G T C A A T G C C G A T A T C G A G C T A C G T A C G T A C G T C G A T A G T C G T C A A G C T A G C T
A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTSMCWGTTKKWCMTT
CACGGCAGTTGGTNN--
 A C G T A C T G A C G T T A G C G T C A A T G C C G A T A T C G A G C T A C G T A C G T A C G T C G A T A G T C G T C A A G C T A G C T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T

RARA/MA0729.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GTSMCWGTTKKWCMTT
CATTGACCTTTTGACCTC
 A C G T A C G T A C T G A C G T T A G C G T C A A T G C C G A T A T C G A G C T A C G T A C G T A C G T C G A T A G T C G T C A A G C T A G C T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C