Information for 7-CATTTACCAGGCA (Motif 13)

A G T C C G T A C A G T A C G T A C G T C G T A A G T C A G T C C G T A C T A G A C T G A G T C G T C A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T C G T A C G T A G C T A A C G T A C T G
p-value:1e-11
log p-value:-2.624e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.6 +/- 21.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATTTACCAGGCA
-HTTTCCCASG--
 A G T C C G T A C A G T A C G T A C G T C G T A A G T C A G T C C G T A C T A G A C T G A G T C G T C A
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATTTACCAGGCA
NNCAATTANN-----
 A C G T A C G T A G T C C G T A C A G T A C G T A C G T C G T A A G T C A G T C C G T A C T A G A C T G A G T C G T C A
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATTTACCAGGCA
ANCGTTTANN-----
 A C G T A C G T A G T C C G T A C A G T A C G T A C G T C G T A A G T C A G T C C G T A C T A G A C T G A G T C G T C A
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATTTACCAGGCA
-ATTTTCCATT--
 A G T C C G T A C A G T A C G T A C G T C G T A A G T C A G T C C G T A C T A G A C T G A G T C G T C A
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CATTTACCAGGCA-
ANATTTTACGAGNNNN
 A C G T A C G T A G T C C G T A C A G T A C G T A C G T C G T A A G T C A G T C C G T A C T A G A C T G A G T C G T C A A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATTTACCAGGCA
NTTTTACGAGN--
 A G T C C G T A C A G T A C G T A C G T C G T A A G T C A G T C C G T A C T A G A C T G A G T C G T C A
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CATTTACCAGGCA
CTGTTGCTAGGS-
 A G T C C G T A C A G T A C G T A C G T C G T A A G T C A G T C C G T A C T A G A C T G A G T C G T C A
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CATTTACCAGGCA
--TTTTCCA----
 A G T C C G T A C A G T A C G T A C G T C G T A A G T C A G T C C G T A C T A G A C T G A G T C G T C A
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CATTTACCAGGCA
NNACTTACCTN---
 A C G T A G T C C G T A C A G T A C G T A C G T C G T A A G T C A G T C C G T A C T A G A C T G A G T C G T C A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CATTTACCAGGCA
TCATCAATCA----
 A C G T A G T C C G T A C A G T A C G T A C G T C G T A A G T C A G T C C G T A C T A G A C T G A G T C G T C A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T