Information for 23-AATGCCTGCAGAA (Motif 41)

C G T A C G T A A C G T A T C G A G T C A G T C A C G T A C T G A G T C C G T A A C T G C G T A C G T A
Reverse Opposite:
C G A T A C G T A G T C A C G T A C T G A G T C C G T A A C T G A C T G A T G C C G T A G C A T A C G T
p-value:1e-7
log p-value:-1.735e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 21.9bp
Average Position of motif in Background34.3 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AATGCCTGCAGAA-
----CCTGCTGAGH
 C G T A C G T A A C G T A T C G A G T C A G T C A C G T A C T G A G T C C G T A A C T G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AATGCCTGCAGAA
AAATCACTGC----
 A C G T C G T A C G T A A C G T A T C G A G T C A G T C A C G T A C T G A G T C C G T A A C T G C G T A C G T A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AATGCCTGCAGAA
ATTTCCTGTN---
 C G T A C G T A A C G T A T C G A G T C A G T C A C G T A C T G A G T C C G T A A C T G C G T A C G T A
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AATGCCTGCAGAA--
ANTGCCTGAGGCAAN
 C G T A C G T A A C G T A T C G A G T C A G T C A C G T A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AATGCCTGCAGAA
CCATTGTATGCAAAT
 A C G T A C G T C G T A C G T A A C G T A T C G A G T C A G T C A C G T A C T G A G T C C G T A A C T G C G T A C G T A
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AATGCCTGCAGAA
-ATGCCAACC---
 C G T A C G T A A C G T A T C G A G T C A G T C A C G T A C T G A G T C C G T A A C T G C G T A C G T A
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AATGCCTGCAGAA
AGAGRRACAGCWGAC
 A C G T A C G T C G T A C G T A A C G T A T C G A G T C A G T C A C G T A C T G A G T C C G T A A C T G C G T A C G T A
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AATGCCTGCAGAA
-TTGCGTGCVA--
 C G T A C G T A A C G T A T C G A G T C A G T C A C G T A C T G A G T C C G T A A C T G C G T A C G T A
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AATGCCTGCAGAA----
--CAATTGCAAAAATAT
 C G T A C G T A A C G T A T C G A G T C A G T C A C G T A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AATGCCTGCAGAA----
AAAATATGCATAATAAA
 C G T A C G T A A C G T A T C G A G T C A G T C A C G T A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A