Information for 10-CATGAGCAAA (Motif 40)

T A G C C G T A C G A T C T A G C G T A C T A G T A G C G C T A C T G A C T G A
Reverse Opposite:
G A C T G A C T C G A T A T C G G A T C G C A T G A T C G C T A C G A T A T C G
p-value:1e-7
log p-value:-1.760e+01
Information Content per bp:1.684
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif6.68%
Number of Background Sequences with motif1257.6
Percentage of Background Sequences with motif2.66%
Average Position of motif in Targets49.0 +/- 28.4bp
Average Position of motif in Background48.6 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CATGAGCAAA--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T T A G C C G T A C G A T C T A G C G T A C T A G T A G C G C T A C T G A C T G A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CATGAGCAAA
GTGCCGTGTGCAAA
 A C G T A C G T A C G T A C G T T A G C C G T A C G A T C T A G C G T A C T A G T A G C G C T A C T G A C T G A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CATGAGCAAA
GCGCATGCGCAC-
 A C G T A C G T A C G T T A G C C G T A C G A T C T A G C G T A C T A G T A G C G C T A C T G A C T G A
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CATGAGCAAA-
-ATATGCAAAT
 T A G C C G T A C G A T C T A G C G T A C T A G T A G C G C T A C T G A C T G A A C G T
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

POU3F4/MA0789.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CATGAGCAAA
-ATTTGCATA
 T A G C C G T A C G A T C T A G C G T A C T A G T A G C G C T A C T G A C T G A
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CATGAGCAAA
GCGCATGCGCAG-
 A C G T A C G T A C G T T A G C C G T A C G A T C T A G C G T A C T A G T A G C G C T A C T G A C T G A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATGAGCAAA-----
TACATGTGCACATAAAA
 A C G T A C G T T A G C C G T A C G A T C T A G C G T A C T A G T A G C G C T A C T G A C T G A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATGAGCAAA
CTCATTTGCATW
 A C G T A C G T T A G C C G T A C G A T C T A G C G T A C T A G T A G C G C T A C T G A C T G A
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATGAGCAAA-----
CAGATGTGCACATACGT
 A C G T A C G T T A G C C G T A C G A T C T A G C G T A C T A G T A G C G C T A C T G A C T G A A C G T A C G T A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CATGAGCAAA-
TAATTTGCATAA
 A C G T T A G C C G T A C G A T C T A G C G T A C T A G T A G C G C T A C T G A C T G A A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A