Information for 21-GMRCCCAWWSKSA (Motif 39)

A C T G G T C A C T G A A G T C A G T C A G T C C G T A C G T A C G T A A T C G A C G T T A G C C G T A
Reverse Opposite:
A C G T A T C G T G C A A T G C C G A T C G A T A C G T A C T G A C T G T A C G A G C T A C G T A G T C
p-value:1e-7
log p-value:-1.774e+01
Information Content per bp:1.785
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif134.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets56.5 +/- 23.7bp
Average Position of motif in Background47.0 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GMRCCCAWWSKSA
GGGTGTGCCCAAAAGG-
 A C G T A C G T A C G T A C G T A C T G G T C A C T G A A G T C A G T C A G T C C G T A C G T A C G T A A T C G A C G T T A G C C G T A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GMRCCCAWWSKSA-
CCGCCCAAGGGCAG
 A C T G G T C A C T G A A G T C A G T C A G T C C G T A C G T A C G T A A T C G A C G T T A G C C G T A A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GMRCCCAWWSKSA
--AGCCAATCGG-
 A C T G G T C A C T G A A G T C A G T C A G T C C G T A C G T A C G T A A T C G A C G T T A G C C G T A
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GMRCCCAWWSKSA---
TGTTCCCATTGTGTACT
 A C G T A C T G G T C A C T G A A G T C A G T C A G T C C G T A C G T A C G T A A T C G A C G T T A G C C G T A A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GMRCCCAWWSKSA
ACTAGCCAATCA--
 A C G T A C T G G T C A C T G A A G T C A G T C A G T C C G T A C G T A C G T A A T C G A C G T T A G C C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GMRCCCAWWSKSA
TTGGGGGCGCCCCTAG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T G A A G T C A G T C A G T C C G T A C G T A C G T A A T C G A C G T T A G C C G T A
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GMRCCCAWWSKSA
TTTGGCGCCAAA-----
 A C G T A C G T A C G T A C G T A C T G G T C A C T G A A G T C A G T C A G T C C G T A C G T A C G T A A T C G A C G T T A G C C G T A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GMRCCCAWWSKSA
-TGCCCCAGGGCA
 A C T G G T C A C T G A A G T C A G T C A G T C C G T A C G T A C G T A A T C G A C G T T A G C C G T A
A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GMRCCCAWWSKSA
-TGCCCCAGGGCA
 A C T G G T C A C T G A A G T C A G T C A G T C C G T A C G T A C G T A A T C G A C G T T A G C C G T A
A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GMRCCCAWWSKSA
TGTCGTGACCCCTTAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T G A A G T C A G T C A G T C C G T A C G T A C G T A A T C G A C G T T A G C C G T A
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T A C G T