Information for 13-CTGGTTGTCATCT (Motif 27)

A G T C A C G T A C T G A T C G C G A T A C G T A C T G C G A T A G T C C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A C T G C G T A G T A C G T C A C G T A T A G C A G T C G T C A C T A G
p-value:1e-9
log p-value:-2.077e+01
Information Content per bp:1.840
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.2 +/- 23.3bp
Average Position of motif in Background43.2 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:CTGGTTGTCATCT
------GTCATN-
 A G T C A C G T A C T G A T C G C G A T A C G T A C T G C G A T A G T C C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CTGGTTGTCATCT
-----TGTCANYT
 A G T C A C G T A C T G A T C G C G A T A C G T A C T G C G A T A G T C C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Atf3/MA0605.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTGGTTGTCATCT
----ACGTCATC-
 A G T C A C G T A C T G A T C G C G A T A C G T A C T G C G A T A G T C C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CTGGTTGTCATCT
-----YSTTATCT
 A G T C A C G T A C T G A T C G C G A T A C G T A C T G C G A T A G T C C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T

GATA2/MA0036.2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGGTTGTCATCT--
-AGATTCTTATCTGT
 A G T C A C G T A C T G A T C G C G A T A C G T A C T G C G A T A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGGTTGTCATCT--
NAGATWNBNATCTNN
 A G T C A C G T A C T G A T C G C G A T A C G T A C T G C G A T A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGGTTGTCATCT
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C A C G T A C T G A T C G C G A T A C G T A C T G C G A T A G T C C G T A A C G T A G T C A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTGGTTGTCATCT
----YTGWCADY-
 A G T C A C G T A C T G A T C G C G A T A C G T A C T G C G A T A G T C C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTGGTTGTCATCT
----NTGTCAN--
 A G T C A C G T A C T G A T C G C G A T A C G T A C T G C G A T A G T C C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTGGTTGTCATCT
-----TCTTATCT
 A G T C A C G T A C T G A T C G C G A T A C G T A C T G C G A T A G T C C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T