Information for 1-TGGTCACATTSCMTTT (Motif 2)

C G A T A C T G C T A G A C G T G T A C C G T A G T A C C G T A A C G T A C G T A T G C G T A C G T C A C G A T A G C T A C G T
Reverse Opposite:
G T C A C T G A C G T A A C G T A C T G T A C G T C G A G T C A A C G T C A T G C G A T A C T G C G T A G A T C G T A C C G T A
p-value:1e-19
log p-value:-4.449e+01
Information Content per bp:1.735
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 30.0bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGGTCACATTSCMTTT
-GGTCACATGAC----
 C G A T A C T G C T A G A C G T G T A C C G T A G T A C C G T A A C G T A C G T A T G C G T A C G T C A C G A T A G C T A C G T
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGTCACATTSCMTTT
-GGTCACGTGGC----
 C G A T A C T G C T A G A C G T G T A C C G T A G T A C C G T A A C G T A C G T A T G C G T A C G T C A C G A T A G C T A C G T
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGTCACATTSCMTTT
GKVTCADRTTWC----
 C G A T A C T G C T A G A C G T G T A C C G T A G T A C C G T A A C G T A C G T A T G C G T A C G T C A C G A T A G C T A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGGTCACATTSCMTTT--
---TNGAATTTCATTNAN
 C G A T A C T G C T A G A C G T G T A C C G T A G T A C C G T A A C G T A C G T A T G C G T A C G T C A C G A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGTCACATTSCMTTT
GGGGTCAAAGTCCAAT-
 A C G T C G A T A C T G C T A G A C G T G T A C C G T A G T A C C G T A A C G T A C G T A T G C G T A C G T C A C G A T A G C T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGGTCACATTSCMTTT
--GTCACATGAY----
 C G A T A C T G C T A G A C G T G T A C C G T A G T A C C G T A A C G T A C G T A T G C G T A C G T C A C G A T A G C T A C G T
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGGTCACATTSCMTTT
----CACATTCCAT--
 C G A T A C T G C T A G A C G T G T A C C G T A G T A C C G T A A C G T A C G T A T G C G T A C G T C A C G A T A G C T A C G T
A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGGTCACATTSCMTTT
----CACATTCCAT--
 C G A T A C T G C T A G A C G T G T A C C G T A G T A C C G T A A C G T A C G T A T G C G T A C G T C A C G A T A G C T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGTCACATTSCMTTT
GKMTCADRTTWC----
 C G A T A C T G C T A G A C G T G T A C C G T A G T A C C G T A A C G T A C G T A T G C G T A C G T C A C G A T A G C T A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGGTCACATTSCMTTT
--GTCACGTGGM----
 C G A T A C T G C T A G A C G T G T A C C G T A G T A C C G T A A C G T A C G T A T G C G T A C G T C A C G A T A G C T A C G T
A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T A C G T