Information for 3-CTTTAAAGGG (Motif 16)

A G T C G C A T A G C T A C G T C T G A G T C A C G T A C T A G A C T G T A C G
Reverse Opposite:
A T G C G T A C A G T C G C A T A C G T G A C T T G C A C T G A C G T A C T A G
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.713
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.21%
Number of Background Sequences with motif462.7
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets40.8 +/- 29.8bp
Average Position of motif in Background50.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CTTTAAAGGG
GNCTATAAAAGG
 A C G T A C G T A G T C G C A T A G C T A C G T C T G A G T C A C G T A C T A G A C T G T A C G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTTTAAAGGG-
-TTTAATTGCN
 A G T C G C A T A G C T A C G T C T G A G T C A C G T A C T A G A C T G T A C G A C G T
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTTTAAAGGG
ACWTCAAAGG-
 A C G T A G T C G C A T A G C T A C G T C T G A G T C A C G T A C T A G A C T G T A C G
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

PB0184.1_Tbp_2/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTAAAGGG
GNNCGCTTAAATCGG
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T A G C T A C G T C T G A G T C A C G T A C T A G A C T G T A C G
C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTTTAAAGGG
ACATCAAAGG-
 A C G T A G T C G C A T A G C T A C G T C T G A G T C A C G T A C T A G A C T G T A C G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTTTAAAGGG-
ACATCAAAGGNA
 A C G T A G T C G C A T A G C T A C G T C T G A G T C A C G T A C T A G A C T G T A C G A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTTTAAAGGG-
AAAGATCAAAGGAA
 A C G T A C G T A C G T A G T C G C A T A G C T A C G T C T G A G T C A C G T A C T A G A C T G T A C G A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTTTAAAGGG---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A G T C G C A T A G C T A C G T C T G A G T C A C G T A C T A G A C T G T A C G A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTTTAAAGGG-
-TTTTATTRGN
 A G T C G C A T A G C T A C G T C T G A G T C A C G T A C T A G A C T G T A C G A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTTTAAAGGG---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A G T C G C A T A G C T A C G T C T G A G T C A C G T A C T A G A C T G T A C G A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A